RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 Q6ZRP5 223 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 TOM1L2Q6ZVM7 507 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 KRTAP7-1Q8IUC3 87 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SLC22A15Q8IZD6 547 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 ELMOD1Q8N336 334 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SFRP1Q8N474 314 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 CD99L2Q8TCZ2 262 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 GANCQ8TET4 914 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 FAM46BQ96A09 425 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SLC35C1Q96A29 364 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 MOCOSQ96EN8 888 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 ZNF300Q96RE9 604 aaPredicted RBP3.51□□□□□ -1.85
CLK1-208ENST00000464454 DDX50Q9BQ39 737 aaKnown RBP3.51□□□□□ -1.85
CLK1-208ENST00000464454 PAPOLGQ9BWT3 736 aaKnown RBP3.51□□□□□ -1.85
CLK1-208ENST00000464454 FGFBP2Q9BYJ0 223 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 C3orf14Q9HBI5 128 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 B3GAT2Q9NPZ5 323 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 SPHK2Q9NRA0 654 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 HMG20BQ9P0W2 317 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 PLCL2Q9UPR0 1127 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 ERVK-19Q9WJR5 959 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 FOXA2Q9Y261 457 aaPredicted RBP3.51□□□□□ -1.85
CLK1-208ENST00000464454 EXOC6BQ9Y2D4 811 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 ETV7Q9Y603 341 aa3.51□□□□□ -1.85
CLK1-208ENST00000464454 KPNA7A9QM74 516 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 NPIPB9F8W1W9 429 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 H7C423 109 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 RNF103O00237 685 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 THEGLP0DJG4 465 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 SKILP12757 684 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 FERP16591 822 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 STMN1P16949 149 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 C4BPBP20851 252 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 ACKR3P25106 362 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 GPR183P32249 361 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 BTG1P62324 171 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 DHODHQ02127 395 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 PDE7AQ13946 482 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 CDC37Q16543 378 aaPredicted RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 HFEQ30201 348 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 SNRNP48Q6IEG0 339 aaKnown RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 PLBD1Q6P4A8 553 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 ZNF613Q6PF04 617 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 Q6ZVQ6 151 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 CYP4V2Q6ZWL3 525 aaPredicted RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 SERPINA12Q8IW75 414 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 PEX5LQ8IYB4 626 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 SLC43A2Q8N370 569 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 ARL10Q8N8L6 244 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 NUP37Q8NFH4 326 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 ZNF519Q8TB69 540 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 SPATA18Q8TC71 538 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 RNASE8Q8TDE3 154 aaKnown RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 HAS2Q92819 552 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 CCDC47Q96A33 483 aaKnown RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 ZNF689Q96CS4 500 aaPredicted RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 ZNF274Q96GC6 653 aaPredicted RBP3.5□□□□□ -1.85
CLK1-208ENST00000464454 NSMCE3Q96MG7 304 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 AGAP3Q96P47 875 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 SYT11Q9BT88 431 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 TRIM15Q9C019 465 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 EGLN1Q9GZT9 426 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 CYP39A1Q9NYL5 469 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 MOSPD1Q9UJG1 213 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 PILRAQ9UKJ1 303 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 KCNK6Q9Y257 313 aa3.5□□□□□ -1.85
CLK1-208ENST00000464454 UMODL1Q5DID0 1318 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 A0A0U1RQG5 324 aaPredicted RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 SERINC4A6NH21 518 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 LMO7DNF2Z398 122 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 CHUKO15111 745 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 P2RX6O15547 441 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 PSMD3O43242 534 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 MTRF1O75570 445 aaKnown RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 EPOP01588 193 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 MT-ND3P03897 115 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 ODC1P11926 461 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 ANPEPP15144 967 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 CYP3A5P20815 502 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 GJB2P29033 226 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 NT5C2P49902 561 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 GABPAQ06546 454 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 GIT2Q14161 759 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 SPHARQ15513 63 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 LYPLAL1Q5VWZ2 237 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 ETFRF1Q6IPR1 90 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 TMEM64Q6YI46 380 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 FRRS1Q6ZNA5 592 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 ZNF410Q86VK4 478 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 CATSPERDQ86XM0 798 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 RTL3Q8N8U3 475 aaKnown RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 SIDT2Q8NBJ9 832 aaKnown RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 RPLP0P6Q8NHW5 317 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 SMPDL3AQ92484 453 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 NAP1L3Q99457 506 aaPredicted RBP3.49□□□□□ -1.85
CLK1-208ENST00000464454 OVOL2Q9BRP0 275 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 FAM213AQ9BRX8 229 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 WWTR1Q9GZV5 400 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 THAP9Q9H5L6 903 aa3.49□□□□□ -1.85
CLK1-208ENST00000464454 MARCH7Q9H992 704 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms