RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MLYCDO95822 493 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 TGFB1P01137 390 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 FHP07954 510 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 C8orf89P0DMQ9 161 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 COX6A1P12074 109 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 ITGA3P26006 1051 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 SERPINB4P48594 390 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 NAGLUP54802 743 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 DDX39BQ13838 428 aaKnown RBP16.06■□□□□ 0.16
VPS52-215ENST00000464425 CPSF6Q16630 551 aaKnown RBP eCLIP16.06■□□□□ 0.16
VPS52-215ENST00000464425 NDUFAF7Q7L592 441 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 LAS2Q8IYD9 372 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 RNF175Q8N4F7 328 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 AMER2Q8N7J2 671 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 L3MBTL4Q8NA19 623 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 OR2L5Q8NG80 312 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 ZNF473Q8WTR7 871 aaKnown RBP16.06■□□□□ 0.16
VPS52-215ENST00000464425 MAGEB10Q96LZ2 347 aaPredicted RBP16.06■□□□□ 0.16
VPS52-215ENST00000464425 MLXIPLQ9NP71 852 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 SEMA4BQ9NPR2 832 aaPredicted RBP16.06■□□□□ 0.16
VPS52-215ENST00000464425 STK38LQ9Y2H1 464 aa16.06■□□□□ 0.16
VPS52-215ENST00000464425 HEMK1Q9Y5R4 338 aaPredicted RBP16.06■□□□□ 0.16
VPS52-215ENST00000464425 CFAP46Q8IYW2 2715 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 NSG1A0A0A6YYJ2 146 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 CLDN9O95484 217 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 OTCP00480 354 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 HPP00738 406 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 IL10P22301 178 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 HPDP32754 393 aaPredicted RBP16.05■□□□□ 0.16
VPS52-215ENST00000464425 CCNG1P51959 295 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 CDH13P55290 713 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 Q0VFX4 171 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 RUNX2Q13950 521 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 MYBPC3Q14896 1274 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 ADPRMQ3LIE5 342 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 CFAP157Q5JU67 520 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 TRIM40Q6P9F5 258 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 ABHD17CQ6PCB6 329 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 TMEM205Q6UW68 189 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 LANCL3Q6ZV70 420 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 PRICKLE2Q7Z3G6 844 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 ZNF605Q86T29 641 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 NUDCD3Q8IVD9 361 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 CA13Q8N1Q1 262 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 OR52B6Q8NGF0 335 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 OR6Y1Q8NGX8 325 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 HUS1BQ8NHY5 278 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 CNDP1Q96KN2 507 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 OR1F2PQ96R84 312 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 MS4A8Q9BY19 250 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 OR51B5Q9H339 312 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 GSTO2Q9H4Y5 243 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 LANCL2Q9NS86 450 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 NKIRAS1Q9NYS0 192 aa16.05■□□□□ 0.16
VPS52-215ENST00000464425 TNRC6AQ8NDV7 1962 aaKnown RBP16.05■□□□□ 0.16
VPS52-215ENST00000464425 LOC102723996A0A087X1L8 192 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 IGHV1-45A0A0A0MS14 117 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 H3BQF6 201 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 PSMD12O00232 456 aaPredicted RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 SAP18O00422 153 aaKnown RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 B3GALT2O43825 422 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 TSPAN8P19075 237 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 SERPINB5P36952 375 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 SOX8P57073 446 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 RHAGQ02094 409 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 TGM3Q08188 693 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 LCP2Q13094 533 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 ABRAXAS2Q15018 415 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 NSDHLQ15738 373 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 GGTA1PQ4G0N0 100 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 FRMD7Q6ZUT3 714 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 CHSY3Q70JA7 882 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 UBE3DQ7Z6J8 389 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 MILR1Q7Z6M3 343 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 CCNYL1Q8N7R7 359 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 TEX19Q8NA77 164 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 TSLPQ969D9 159 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 THOC3Q96J01 351 aaKnown RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 QRFPRQ96P65 431 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 ZNF382Q96SR6 550 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 MTERF1Q99551 399 aaKnown RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 MECRQ9BV79 373 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 GATA5Q9BWX5 397 aaPredicted RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 ZNF552Q9H707 407 aaPredicted RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 CLK4Q9HAZ1 481 aaKnown RBP16.04■□□□□ 0.16
VPS52-215ENST00000464425 MED4Q9NPJ6 270 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 TSC22D4Q9Y3Q8 395 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 ZNF451Q9Y4E5 1061 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 PCDHGA11Q9Y5H2 935 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 SCN2AQ99250 2005 aa16.04■□□□□ 0.16
VPS52-215ENST00000464425 A0A088AWK7 358 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 H0YIV9 168 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 RTCAO00442 366 aaKnown RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 PPP6CO00743 305 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 PCDH17O14917 1159 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 SLC28A2O43868 658 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 NPHS1O60500 1241 aa16.03■□□□□ 0.16
VPS52-215ENST00000464425 SEC24DO94855 1032 aaPredicted RBP16.03■□□□□ 0.16
VPS52-215ENST00000464425 RNH1P13489 461 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms