RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DDCP20711 480 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 DCKP27707 260 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 CMPK1P30085 196 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 PEBP1P30086 187 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 TFF2Q03403 129 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 VAC14Q08AM6 782 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 MYBPC3Q14896 1274 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 PRSS53Q2L4Q9 553 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 TBPL2Q6SJ96 375 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 PLD3Q8IV08 490 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 ADGRF3Q8IZF5 1079 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 TBC1D19Q8N5T2 526 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 FAM81AQ8TBF8 368 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 SLC6A16Q9GZN6 736 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 LHX9Q9NQ69 397 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 SLC2A4RGQ9NR83 387 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 TAAR2Q9P1P5 351 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 UTS2RQ9UKP6 389 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 ZNF682O95780 498 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 EML2O95834 649 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 IGLV3-19P01714 112 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 SRP54P61011 504 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 LRRC32Q14392 662 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 HEPACAMQ14CZ8 416 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM35AQ53FP2 167 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 TTC23Q5W5X9 447 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 CLEC4FQ8N1N0 589 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 OR52N2Q8NGI0 321 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 DPH2Q9BQC3 489 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 RAD21L1Q9H4I0 556 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 CXorf21Q9HAI6 301 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 OR6C2Q9NZP2 312 aa20.72■□□□□ 0.91
PDLIM2-216ENST00000464275 RASGRP1O95267 797 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 SNAP29O95721 258 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 NTRK1P04629 796 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 ALPLP05186 524 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 THRBP10828 461 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 SRFP11831 508 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 PCGF2P35227 344 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 ACTR1BP42025 376 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 MAGEA2P43356 314 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 ACTR1AP61163 376 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 TRA2BP62995 288 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 BIRC2Q13490 618 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 ZIC1Q15915 447 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 CBLL1Q75N03 491 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 EIF3MQ7L2H7 374 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 UBE3DQ7Z6J8 389 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 AMIGO1Q86WK6 493 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 ZDHHC13Q8IUH4 622 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 DRAXINQ8NBI3 349 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM145Q8NBT3 493 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 FLCNQ8NFG4 579 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 LCN9Q8WX39 176 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 DPH7Q9BTV6 452 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 SARGQ9BW04 601 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 TMEM168Q9H0V1 697 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 UBE2ZQ9H832 354 aaPredicted RBP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 DDX31Q9H8H2 851 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 TRNAU1APQ9NX07 287 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 SPHK1Q9NYA1 384 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 USE1Q9NZ43 259 aa20.71■□□□□ 0.91
PDLIM2-216ENST00000464275 G3V2T6 193 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 MAN2B1O00754 1011 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 CPNE6O95741 557 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 SERPIND1P05546 499 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 JUNBP17275 347 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 AHRP35869 848 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 BCL6P41182 706 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 CCR5P51681 352 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 TEAD4Q15561 434 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 ALG11Q2TAA5 492 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 RBM48Q5RL73 367 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 OR4C11Q6IEV9 310 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 ZNF773Q6PK81 442 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 STK32CQ86UX6 486 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 ZDHHC21Q8IVQ6 265 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 NAGSQ8N159 534 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 C11orf65Q8NCR3 313 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 ZNF764Q96H86 408 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 ZNF624Q9P2J8 865 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 FAF1Q9UNN5 650 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 TRIM64BA6NI03 449 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 PRAMEF26H0Y7S4 382 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 SEC24DO94855 1032 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 CHRM5P08912 532 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 NUDT7P0C024 238 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 DGKEP52429 567 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 MVDP53602 400 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 FADDQ13158 208 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 TUBA3CQ13748 450 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 LRIT3Q3SXY7 679 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 OTUD3Q5T2D3 398 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 ZNF852Q6ZMS4 543 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 Q6ZSR6 202 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 FAM20CQ8IXL6 584 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 MMP21Q8N119 569 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 OR5K1Q8NHB7 308 aa20.7■□□□□ 0.9
PDLIM2-216ENST00000464275 CCL4L1Q8NHW4 92 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms