RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 RDH11Q8TC12 318 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 TSLPQ969D9 159 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 ATP6V1E2Q96A05 226 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 FAR2Q96K12 515 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 SERINC2Q96SA4 455 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 SORBS1Q9BX66 1292 aaKnown RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 RRAGDQ9NQL2 400 aaPredicted RBP16.65■□□□□ 0.26
VPS52-214ENST00000463486 OXSMQ9NWU1 459 aa16.65■□□□□ 0.26
VPS52-214ENST00000463486 SCN2AQ99250 2005 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 A6NL46 340 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 SAP18O00422 153 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 PLPP1O14494 284 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 UBFD1O14562 309 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 OTCP00480 354 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 MYL2P10916 166 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 CPA3P15088 417 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 HIST1H1TP22492 207 aaPredicted RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 PTX3P26022 381 aaPredicted RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 ARFIP1P53367 373 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 MTTPP55157 894 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 LIM2P55344 173 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 DNAJB13P59910 316 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 EEF1A2Q05639 463 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 AIMP2Q13155 320 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 CUL3Q13618 768 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 DDX39BQ13838 428 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 BEND6Q5SZJ8 279 aaPredicted RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 FRG2Q64ET8 278 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 SRRM1Q8IYB3 904 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 ACOT4Q8N9L9 421 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 CLEC1AQ8NC01 280 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 MYRIPQ8NFW9 859 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 PSMF1Q92530 271 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 REPS1Q96D71 796 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 APOPT1Q96IL0 206 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 ZIM3Q96PE6 472 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 FRG2BQ96QU4 278 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 ZNF382Q96SR6 550 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 SMAD5Q99717 465 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 SLC25A23Q9BV35 468 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 ZNF552Q9H707 407 aaPredicted RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 ZNF160Q9HCG1 818 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 FARSBQ9NSD9 589 aaKnown RBP16.64■□□□□ 0.25
VPS52-214ENST00000463486 DAPP1Q9UN19 280 aa16.64■□□□□ 0.25
VPS52-214ENST00000463486 IGHV3-20A0A0C4DH32 117 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 TGFBR3LH3BV60 316 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 B3GALT2O43825 422 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 TYROBPO43914 113 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 B4GALT2O60909 372 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 OR4F21O95013 312 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 BSGP35613 385 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 RAB38P57729 211 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 MYBPC3Q14896 1274 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 PCLAFQ15004 111 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 OR4C11Q6IEV9 310 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 QSOX2Q6ZRP7 698 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 CPEB2Q7Z5Q1 589 aaKnown RBP16.63■□□□□ 0.25
VPS52-214ENST00000463486 SCUBE1Q8IWY4 988 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 SRFBP1Q8NEF9 429 aaKnown RBP16.63■□□□□ 0.25
VPS52-214ENST00000463486 MTFMTQ96DP5 389 aaKnown RBP16.63■□□□□ 0.25
VPS52-214ENST00000463486 CCDC126Q96EE4 140 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 CSF3RQ99062 836 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 MAPKAP1Q9BPZ7 522 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 SLC17A7Q9P2U7 560 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 TRPS1Q9UHF7 1281 aa16.63■□□□□ 0.25
VPS52-214ENST00000463486 TNRC6AQ8NDV7 1962 aaKnown RBP16.63■□□□□ 0.25
VPS52-214ENST00000463486 NSG1A0A0A6YYJ2 146 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 CCDC151A5D8V7 595 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 SPAG7O75391 227 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 CELA2AP08217 269 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 MAOAP21397 527 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 JAK1P23458 1154 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 TSFMP43897 325 aaKnown RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 NAGLUP54802 743 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 TGM3Q08188 693 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 LCP2Q13094 533 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 RAPSNQ13702 412 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 ABRAXAS2Q15018 415 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 NSDHLQ15738 373 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 KRT71Q3SY84 523 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 LACTB2Q53H82 288 aaPredicted RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 TCHHL1Q5QJ38 904 aaPredicted RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 C10orf62Q5T681 223 aaPredicted RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 MRM1Q6IN84 353 aaKnown RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 ASB18Q6ZVZ8 466 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 PARP9Q8IXQ6 854 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 ARMC2Q8NEN0 867 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 RGMAQ96B86 450 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 MAGEB10Q96LZ2 347 aaPredicted RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 ROGDIQ9GZN7 287 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 ZBTB20Q9HC78 741 aaPredicted RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 LYRM4Q9HD34 91 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 TNFRSF12AQ9NP84 129 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 NECTIN3Q9NQS3 549 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 GPR83Q9NYM4 423 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 CNTRLQ7Z7A1 2325 aa16.62■□□□□ 0.25
VPS52-214ENST00000463486 GCN1Q92616 2671 aaKnown RBP16.62■□□□□ 0.25
VPS52-214ENST00000463486 A0A088AWK7 358 aa16.61■□□□□ 0.25
VPS52-214ENST00000463486 TCRBV16S1A1N1A0A5B0 115 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms