RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PSD3Q9NYI0 1048 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PLLPQ9Y342 182 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 COPG1Q9Y678 874 aaKnown RBP12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SCN2AQ99250 2005 aa12.5□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NSG1A0A0A6YYJ2 146 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PSMD12O00232 456 aaPredicted RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR7A17O14581 309 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CHST10O43529 356 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RDH16O75452 317 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CYC1P08574 325 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RNH1P13489 461 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PLA2G16P53816 162 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CDH13P55290 713 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IFT88Q13099 833 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DDX39BQ13838 428 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RCN2Q14257 317 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ADPRMQ3LIE5 342 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 UNC50Q53HI1 259 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CEP85LQ5SZL2 805 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MFSD4BQ5TF39 518 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NDUFAF7Q7L592 441 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 VN1R5Q7Z5H4 357 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KBTBD2Q8IY47 623 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 BANPQ8N9N5 519 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 Q8NA96 180 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MYRIPQ8NFW9 859 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR11G2Q8NGC1 345 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DNAJB14Q8TBM8 379 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 L3HYPDHQ96EM0 354 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZIM3Q96PE6 472 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 KCNC2Q96PR1 638 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR1F2PQ96R84 312 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LMF1Q96S06 567 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 WDR77Q9BQA1 342 aaPredicted RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TBCDQ9BTW9 1192 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZBTB26Q9HCK0 441 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HCN3Q9P1Z3 774 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 EMCNQ9ULC0 261 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MKL2Q9ULH7 1088 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RNF11Q9Y3C5 154 aa12.49□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CLEC18AA5D8T8 446 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 IDSB3KWA1 339 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 G3V2L1 256 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 H3BQF6 201 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FOXE1O00358 373 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 FFAR3O14843 346 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GPR42O15529 346 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 B3GALT2O43825 422 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TGFB1P01137 390 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GP1BBP13224 206 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ICAM2P13598 275 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 JAK1P23458 1154 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HNRNPH1P31943 449 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 XCR1P46094 333 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 UQCRFS1P47985 274 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RAP1GDS1P52306 607 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DNAJB13P59910 316 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TRAF3Q13114 568 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SYT16Q17RD7 645 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 AP5B1Q2VPB7 878 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 GGTA1PQ4G0N0 100 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 BEND6Q5SZJ8 279 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 DEPDC1Q5TB30 811 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ABHD17CQ6PCB6 329 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CLEC18BQ6UXF7 455 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ISLR2Q6UXK2 745 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 Q6ZS92 163 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 LAPTM4BQ86VI4 370 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PDSS2Q86YH6 399 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZC3H7AQ8IWR0 971 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HOMEZQ8IX15 550 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CISD2Q8N5K1 135 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CCNYL1Q8N7R7 359 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 CLEC18CQ8NCF0 446 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR4F6Q8NGB9 312 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 OR52B6Q8NGF0 335 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 HUS1BQ8NHY5 278 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PRR7Q8TB68 274 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TRPC4APQ8TEL6 797 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 RGMAQ96B86 450 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SNRNP40Q96DI7 357 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 PEX11GQ96HA9 241 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 TMEM237Q96Q45 408 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 F2RL3Q96RI0 385 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SERINC2Q96SA4 455 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 MS4A8Q9BY19 250 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 STMN4Q9H169 189 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ELOVL6Q9H5J4 265 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ZNF160Q9HCG1 818 aa12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 ARGLU1Q9NWB6 273 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP3-207ENST00000461009 SNX6Q9UNH7 406 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms