RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ZNF24P17028 368 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 HLCSP50747 726 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 CLCN2P51788 898 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 C3AR1Q16581 482 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 MAPKAPK3Q16644 382 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 PDK4Q16654 411 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.28■■□□□ 1
PTPN4-207ENST00000460162 MRGPRGQ86SM5 289 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 SPATA6LQ8N4H0 392 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 PTCD3Q96EY7 689 aaKnown RBP21.28■■□□□ 1
PTPN4-207ENST00000460162 QRFPRQ96P65 431 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 EFCAB11Q9BUY7 163 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 REXO4Q9GZR2 422 aaKnown RBP21.28■■□□□ 1
PTPN4-207ENST00000460162 TSPAN10Q9H1Z9 355 aaPredicted RBP21.28■■□□□ 1
PTPN4-207ENST00000460162 PRTFDC1Q9NRG1 225 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 GRHL1Q9NZI5 618 aa21.28■■□□□ 1
PTPN4-207ENST00000460162 A0A0G2JN53 185 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 TRBV11-1A0A0K0K1C0 115 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 A8MUA0 341 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 NPIPA5E9PKD4 350 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 CLDN4O14493 209 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 WISP2O76076 250 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 C1QAP02745 245 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 HSPA7P48741 367 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 RAB10P61026 200 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 RUNX2Q13950 521 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 OR4D1Q15615 310 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 SP5Q6BEB4 398 aaPredicted RBP21.27■■□□□ 1
PTPN4-207ENST00000460162 VN1R5Q7Z5H4 357 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 ZNF227Q86WZ6 799 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 ZNF595Q8IYB9 648 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 SNX31Q8N9S9 440 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 VMP1Q96GC9 406 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 UBXN10Q96LJ8 280 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 SERINC2Q96SA4 455 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 COPS7BQ9H9Q2 264 aaPredicted RBP21.27■■□□□ 1
PTPN4-207ENST00000460162 CD274Q9NZQ7 290 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 TINAGQ9UJW2 476 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 NPIPA1Q9UND3 350 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 KLF13Q9Y2Y9 288 aaPredicted RBP21.27■■□□□ 1
PTPN4-207ENST00000460162 CLDN16Q9Y5I7 305 aa21.27■■□□□ 1
PTPN4-207ENST00000460162 ENO4A6NNW6 628 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 TBX6O95947 436 aaPredicted RBP21.26■□□□□ 0.99
PTPN4-207ENST00000460162 S100BP04271 92 aaPredicted RBP21.26■□□□□ 0.99
PTPN4-207ENST00000460162 TFEBP19484 476 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 PLA2G16P53816 162 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 MTTPP55157 894 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 TGM3Q08188 693 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 C2orf54Q08AI8 447 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 SLC13A2Q13183 592 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 LAPTM5Q13571 262 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 RCN2Q14257 317 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 XKR6Q5GH73 641 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 PAGE2BQ5JRK9 111 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 LRRC70Q7Z2Q7 622 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 SPPL2CQ8IUH8 684 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 GHDCQ8N2G8 530 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 FAM47BQ8NA70 645 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 POGLUT1Q8NBL1 392 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 KIAA1191Q96A73 305 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 RUBCNLQ9H714 662 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 ADAP2Q9NPF8 381 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 RNF112Q9ULX5 631 aa21.26■□□□□ 0.99
PTPN4-207ENST00000460162 ASNA1O43681 348 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 PRAMEF4O60810 478 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 ESRRAP11474 423 aaPredicted RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 AGAP20933 346 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 CERS1P27544 350 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 SPRP35270 261 aaPredicted RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 GPX6P59796 221 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 CAV1Q03135 178 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 DOC2AQ14183 400 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 NAA30Q147X3 362 aaPredicted RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 FBXO48Q5FWF7 155 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 PRAMEF9Q5VWM5 478 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 ADNP2Q6IQ32 1131 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 ABHD17CQ6PCB6 329 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 XKRXQ6PP77 449 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 C3orf62Q6ZUJ4 267 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 CTAGE3PQ8IX95 158 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 CPSF7Q8N684 471 aaKnown RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 PNO1Q9NRX1 252 aaKnown RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 ZNF223Q9UK11 482 aaPredicted RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 PTBP2Q9UKA9 531 aaKnown RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 DAPP1Q9UN19 280 aa21.25■□□□□ 0.99
PTPN4-207ENST00000460162 UTP11Q9Y3A2 253 aaKnown RBP21.25■□□□□ 0.99
PTPN4-207ENST00000460162 PCNX1Q96RV3 2341 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 TGFBR3LH3BV60 316 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 CD22P20273 847 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 STX2P32856 288 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 HNRNPFP52597 415 aaKnown RBP21.24■□□□□ 0.99
PTPN4-207ENST00000460162 LIM2P55344 173 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 ADORA2A-AS1P86434 159 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 E2F2Q14209 437 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 TBCCQ15814 346 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 GRTP1Q5TC63 336 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 CYP4Z2PQ8N1L4 340 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 TMEM52Q8NDY8 209 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 NCLNQ969V3 563 aa21.24■□□□□ 0.99
PTPN4-207ENST00000460162 ESAMQ96AP7 390 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms