RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 USP27XA6NNY8 438 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 A8MVJ9 347 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NCF1CA8MVU1 366 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CDC7O00311 574 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ERI3O43414 337 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRKRAO75569 313 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KRT14P02533 472 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C8GP07360 202 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GLI4P10075 376 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NCF1P14598 390 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CAPN3P20807 821 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ACVR2AP27037 513 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 UQCRC1P31930 480 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GMPRP36959 345 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GDF5P43026 501 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MAGEA3P43357 314 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MAGEA6P43360 314 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SCTRP47872 440 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRPC1P48995 793 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SSR4P51571 173 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PLA2G16P53816 162 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 BTN3A2P78410 334 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCZ1BP86790 482 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCZ1P86791 482 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RELAQ04206 551 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC13A2Q13183 592 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SP140Q13342 867 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLBPQ14493 270 aaKnown RBP eCLIP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RBBP5Q15291 538 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 POU4F3Q15319 338 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MSS51Q4VC12 460 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HECTD2Q5U5R9 776 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 UGT3A1Q6NUS8 523 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRMT10BQ6PF06 316 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SBSNQ6UWP8 590 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 IL20RBQ6UXL0 311 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ABHD13Q7L211 337 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 VN1R5Q7Z5H4 357 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PCGF5Q86SE9 256 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GAS2L3Q86XJ1 694 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TGIF2LYQ8IUE0 185 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SCUBE1Q8IWY4 988 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM251Q8N6I4 163 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZFP62Q8NB50 900 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NAXEQ8NCW5 288 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PLPP5Q8NEB5 264 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 WFDC11Q8NEX6 87 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ABHD11Q8NFV4 315 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR56A3Q8NH54 315 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LILRB4Q8NHJ6 448 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NT5CQ8TCD5 201 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ASB5Q8WWX0 329 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ASB15Q8WXK1 588 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KIAA1191Q96A73 305 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 THAP11Q96EK4 314 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CFAP36Q96G28 342 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RMND5BQ96G75 393 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SCYL1Q96KG9 808 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CAPZA3Q96KX2 299 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CALR3Q96L12 384 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RASL10BQ96S79 203 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM167BQ9BTA0 163 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 POLDIP3Q9BY77 421 aaKnown RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TSGA10Q9BZW7 698 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 OR8D2Q9GZM6 311 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLC6A16Q9GZN6 736 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLEC4MQ9H2X3 399 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TRIM45Q9H8W5 580 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PARVBQ9HBI1 364 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRDM9Q9NQV7 894 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DLL4Q9NR61 685 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PLSCR2Q9NRY7 297 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HPF1Q9NWY4 346 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ALKBH4Q9NXW9 302 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TUBA8Q9NY65 449 aaPredicted RBP5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ST6GALNAC2Q9UJ37 374 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZFP69BQ9UJL9 534 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PSAT1Q9Y617 370 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 COMMD10Q9Y6G5 202 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARID1AO14497 2285 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 COL6A5A8TX70 2615 aa5.56□□□□□ -1.52
HLA-DPA3-207ENST00000454398 A0A1B0GTL3 188 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LRRC3CA6NJW4 275 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SDR42E2A6NKP2 422 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FIGNL2A6NMB9 653 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ACOT7O00154 380 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HRKO00198 91 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RTCAO00442 366 aaKnown RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLDN4O14493 209 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KLK8O60259 260 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LDB3O75112 727 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CTAG2O75638 210 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GLSO94925 669 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 WDR47O94967 919 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TBX6O95947 436 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 IFNA16P05015 189 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HOXD4P09016 255 aaPredicted RBP5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RFPL3SP0C7P2 107 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 BMP5P22003 454 aa5.55□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HRH2P25021 359 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms