RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ERGP11308 486 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 BSGP35613 385 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 HSD17B2P37059 387 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PRDX1Q06830 199 aaKnown RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 HTR4Q13639 388 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PDE7AQ13946 482 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 VEZF1Q14119 521 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 SPDYE7PQ495Y7 208 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 GCNT6Q5T4J0 391 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PGBD3Q8N328 593 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 FBXL6Q8N531 539 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 ABHD11Q8NFV4 315 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 RAB8BQ92930 207 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 TM4SF18Q96CE8 201 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 ZNF717Q9BY31 904 aaPredicted RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 PCBD2Q9H0N5 130 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 CHST8Q9H2A9 424 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 EPB41L1Q9H4G0 881 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 WASH6PQ9NQA3 447 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 TBC1D29Q9UFV1 150 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 RAB23Q9ULC3 237 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 NCKAP1Q9Y2A7 1128 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 SLC17A4Q9Y2C5 497 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 NINQ8N4C6 2090 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PRSS38A1L453 326 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 HPRP00739 348 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 LTBRP36941 435 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 RPL3P39023 403 aaKnown RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 MAGEA2P43356 314 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 DAPP51397 102 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 RAD23AP54725 363 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 IL5RAQ01344 420 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PMS2P3Q13401 168 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 UAP1L1Q3KQV9 507 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 TPRG1LQ5T0D9 272 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 TRIM40Q6P9F5 258 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PAGE2Q7Z2X7 111 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 OTUB1Q96FW1 271 aaPredicted RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 MRGPRX1Q96LB2 322 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 GABRG3Q99928 467 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 DPH7Q9BTV6 452 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 NLNQ9BYT8 704 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 PELI2Q9HAT8 420 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 TM9SF3Q9HD45 589 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 ICKQ9UPZ9 632 aa11.23□□□□□ -0.61
VTA1-203ENST00000452973 SNRNP200O75643 2136 aaKnown RBP11.23□□□□□ -0.61
VTA1-203ENST00000452973 DDCP20711 480 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 IGFBP4P22692 258 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RRM2P31350 389 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 TUBA4AP68366 448 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 REEP5Q00765 189 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 GRSF1Q12849 480 aaKnown RBP eCLIP11.22□□□□□ -0.61
VTA1-203ENST00000452973 MYBPC3Q14896 1274 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 HEPACAMQ14CZ8 416 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 AGERQ15109 404 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RPE65Q16518 533 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 SHQ1Q6PI26 577 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 B3GNT6Q6ZMB0 384 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 NUDT13Q86X67 352 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 BPIFB6Q8NFQ5 453 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 OR52N2Q8NGI0 321 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CNIH3Q8TBE1 160 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RGMAQ96B86 450 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 FCRL4Q96PJ5 515 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 TIMM29Q9BSF4 260 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CCDC90BQ9GZT6 254 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RHBGQ9H310 441 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 LHX9Q9NQ69 397 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 THUMPD1Q9NXG2 353 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 SPATA7Q9P0W8 599 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 CDC14AQ9UNH5 594 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 HEMK1Q9Y5R4 338 aaPredicted RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 USP34Q70CQ2 3546 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 GPR89AB7ZAQ6 455 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 PDPK1O15530 556 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RASGRP1O95267 797 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 BMP10O95393 424 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 GPR89BP0CG08 455 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 IL1RNP18510 177 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 EPHA2P29317 976 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 PCGF2P35227 344 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 GRK3P35626 688 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 ALDH3B2P48448 385 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RAB8AP61006 207 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 KCNJ10P78508 379 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CDK6Q00534 326 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CD47Q08722 323 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 LRRC74AQ0VAA2 488 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 TP53BP2Q13625 1128 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 RAPSNQ13702 412 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 LRRC32Q14392 662 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 RPS26P11Q5JNZ5 115 aaPredicted RBP11.22□□□□□ -0.61
VTA1-203ENST00000452973 TMEM92Q6UXU6 159 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 HMGB4Q8WW32 186 aa11.22□□□□□ -0.61
VTA1-203ENST00000452973 OR1E3Q8WZA6 343 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms