RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 KCNE2Q9Y6J6 123 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 PRAMEF25A6NGN4 478 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 OXSR1O95747 527 aaPredicted RBP10.85□□□□□ -0.67
SYVN1-204ENST00000449943 ANXA8P13928 327 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 RGS6P49758 472 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 SLBPQ14493 270 aaKnown RBP eCLIP10.85□□□□□ -0.67
SYVN1-204ENST00000449943 SPIN4Q56A73 249 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 MED27Q6P2C8 311 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 MMP21Q8N119 569 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 DEPDC4Q8N2C3 294 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 VPS35Q96QK1 796 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 QPCTLQ9NXS2 382 aa10.85□□□□□ -0.67
SYVN1-204ENST00000449943 SCN8AQ9UQD0 1980 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 PRAMEF33A0A0G2JMD5 474 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 LINC00854A0A1B0GVQ3 168 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 NPIPB8E9PQR5 432 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 H0YIV9 168 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 UGDHO60701 494 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 PRAMEF10O60809 474 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 MED26O95402 600 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 PRNPP04156 253 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ZNF8P17098 575 aaPredicted RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 NR4A2P43354 598 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CDK6Q00534 326 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 RAB33AQ14088 237 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ZNF181Q2M3W8 571 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ARSIQ5FYB1 569 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 PTCHD4Q6ZW05 846 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 HTR3DQ70Z44 454 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 COMMD6Q7Z4G1 85 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 C11orf96Q7Z7L8 435 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 RASGEF1AQ8N9B8 481 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 UBE2E3Q969T4 207 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SORBS1Q9BX66 1292 aaKnown RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SIAEQ9HAT2 523 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 EXO1Q9UQ84 846 aaKnown RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 IFT52Q9Y366 437 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SPACA6W5XKT8 324 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 TEX28O15482 410 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ASNA1O43681 348 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 KIAA0513O60268 411 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 LEFTY1O75610 366 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CYP7B1O75881 506 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 GADD45GO95257 159 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 UGT2B10P36537 528 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 TAS2R50P59544 299 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 RPS26P62854 115 aaKnown RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ATAT1Q5SQI0 421 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 TMEM220Q6QAJ8 160 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CHTF18Q8WVB6 975 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 C19orf43Q9BQ61 176 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 NUAK2Q9H093 628 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 REEP4Q9H6H4 257 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ANKHQ9HCJ1 492 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 MIEF1Q9NQG6 463 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 MAPRE3Q9UPY8 281 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 HS3ST2Q9Y278 367 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SAGE2PA6NJ88 616 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 RGS5O15539 181 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SOX14O95416 240 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 OLFM2O95897 454 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 GPC1P35052 558 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 FEN1P39748 380 aaKnown RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 VEGFBP49765 207 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 HNRNPFP52597 415 aaKnown RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CDC42P60953 191 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 TBPL1P62380 186 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ZNF763Q0D2J5 394 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 PTGES3Q15185 160 aaKnown RBP10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SLC5A12Q1EHB4 618 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 FAM217AQ8IXS0 508 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CPA6Q8N4T0 437 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 KIAA1958Q8N8K9 716 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SCAIQ8N9R8 606 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CAPSLQ8WWF8 208 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 SLC35B4Q969S0 331 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 CPNE5Q9HCH3 593 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 ITM2BQ9Y287 266 aa10.84□□□□□ -0.67
SYVN1-204ENST00000449943 RNASET2O00584 256 aaKnown RBP10.83□□□□□ -0.68
SYVN1-204ENST00000449943 SSX4O60224 188 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 PSIP1O75475 530 aaKnown RBP10.83□□□□□ -0.68
SYVN1-204ENST00000449943 SLCO2B1O94956 709 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 CCNB2O95067 398 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 KLK1P06870 262 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.685e-14■■■■■ 51.1
SYVN1-204ENST00000449943 KCNC3Q14003 757 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 LEXMQ3ZCV2 418 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 RPS26P11Q5JNZ5 115 aaPredicted RBP10.83□□□□□ -0.68
SYVN1-204ENST00000449943 SPANXN2Q5MJ10 180 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 CYP4Z2PQ8N1L4 340 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 METTL4Q8N3J2 472 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 WRAP53Q9BUR4 548 aaKnown RBP10.83□□□□□ -0.68
SYVN1-204ENST00000449943 SPATA9Q9BWV2 254 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 SP140LQ9H930 580 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 MARCH7Q9H992 704 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 ERVK13-1Q9NX77 482 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 EHD3Q9NZN3 535 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 CFAP20Q9Y6A4 193 aaKnown RBP10.83□□□□□ -0.68
SYVN1-204ENST00000449943 TRBC2A0A5B9 178 aa10.83□□□□□ -0.68
SYVN1-204ENST00000449943 TAF4O00268 1085 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms