RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 A0A1W2PP18 115 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 HYKKA2RU49 373 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 SCAMP2O15127 329 aaKnown RBP18.27■□□□□ 0.51
RPS28-202ENST00000449223 GUCY1B2O75343 617 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 OR2B3O76000 313 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 CAPN3P20807 821 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 CERS1P27544 350 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 ITGA1P56199 1179 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 KCNK10P57789 538 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 SKP1P63208 163 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 BTN3A2P78410 334 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 STX5Q13190 355 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 HEPACAMQ14CZ8 416 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 TRIP6Q15654 476 aaKnown RBP18.27■□□□□ 0.51
RPS28-202ENST00000449223 SPRED3Q2MJR0 410 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 MUM1Q2TAK8 710 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 DEFB134Q4QY38 66 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 CYB5D1Q6P9G0 228 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 BPHLQ86WA6 291 aaPredicted RBP18.27■□□□□ 0.51
RPS28-202ENST00000449223 PDSS2Q86YH6 399 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 TTC29Q8NA56 475 aaPredicted RBP18.27■□□□□ 0.51
RPS28-202ENST00000449223 OR8J2Q8NGG1 315 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 ZCCHC10Q8TBK6 192 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 SPDL1Q96EA4 605 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 REEP4Q9H6H4 257 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 STARD5Q9NSY2 213 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 ATP6V1HQ9UI12 483 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 SERTAD3Q9UJW9 196 aa18.27■□□□□ 0.51
RPS28-202ENST00000449223 B3GALT2O43825 422 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 NSA2O95478 260 aaKnown RBP18.26■□□□□ 0.51
RPS28-202ENST00000449223 FURINP09958 794 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 ESRRAP11474 423 aaPredicted RBP18.26■□□□□ 0.51
RPS28-202ENST00000449223 DRD2P14416 443 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 DDCP20711 480 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 HPCAL1P37235 193 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 INSM1Q01101 510 aaPredicted RBP18.26■□□□□ 0.51
RPS28-202ENST00000449223 SRSF11Q05519 484 aaKnown RBP18.26■□□□□ 0.51
RPS28-202ENST00000449223 SLAMF1Q13291 335 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 UGT8Q16880 541 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 FAM214AQ32MH5 1076 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 PHF19Q5T6S3 580 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 MSANTD1Q6ZTZ1 278 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 R3HCC1LQ7Z5L2 792 aaKnown RBP18.26■□□□□ 0.51
RPS28-202ENST00000449223 GPR135Q8IZ08 494 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 POU5F2Q8N7G0 328 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 AGBL5Q8NDL9 886 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 COQ8BQ96D53 544 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 SLC45A3Q96JT2 553 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 RTKNQ9BST9 563 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 SPRTNQ9H040 489 aaPredicted RBP18.26■□□□□ 0.51
RPS28-202ENST00000449223 ANKHQ9HCJ1 492 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 LYRM4Q9HD34 91 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 EHD3Q9NZN3 535 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 KCMF1Q9P0J7 381 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 DAPP1Q9UN19 280 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 SCN3AQ9NY46 2000 aa18.26■□□□□ 0.51
RPS28-202ENST00000449223 LOC100653049A0A140TA62 436 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.25■□□□□ 0.51
RPS28-202ENST00000449223 FOXS1O43638 330 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 KRT34O76011 436 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 PGRP06401 933 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 IL3P08700 152 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 IL1RNP18510 177 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 CSRP1P21291 193 aaKnown RBP18.25■□□□□ 0.51
RPS28-202ENST00000449223 HNRNPH2P55795 449 aaKnown RBP18.25■□□□□ 0.51
RPS28-202ENST00000449223 FAM174BQ3ZCQ3 159 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 PRSS41Q7RTY9 318 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 BMPERQ8N8U9 685 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 C1orf21Q9H246 121 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 TEX10Q9NXF1 929 aaPredicted RBP18.25■□□□□ 0.51
RPS28-202ENST00000449223 MS4A12Q9NXJ0 267 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 TAS2R7Q9NYW3 318 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 PHF11Q9UIL8 331 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 NAALAD2Q9Y3Q0 740 aa18.25■□□□□ 0.51
RPS28-202ENST00000449223 ASPDHA6ND91 283 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 CCDC154A6NI56 674 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 H0YIG0 161 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 TMX2-CTNND1H3BSU7 103 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 NR5A2O00482 541 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 FBP2O00757 339 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 TM4SF5O14894 197 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 CFLARO15519 480 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 PROM1O43490 865 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 KIAA0754O94854 1291 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 MED26O95402 600 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 B3GALT4O96024 378 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 CSTF2P33240 577 aaKnown RBP eCLIP18.24■□□□□ 0.51
RPS28-202ENST00000449223 ARSFP54793 590 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 IL11RAQ14626 422 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 C16orf72Q14CZ0 275 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 TLR1Q15399 786 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 VPS26BQ4G0F5 336 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 SPANXN4Q5MJ08 99 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 GPR180Q86V85 440 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 NETO1Q8TDF5 533 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 PRPF18Q99633 342 aaKnown RBP18.24■□□□□ 0.51
RPS28-202ENST00000449223 FAIM2Q9BWQ8 316 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 SRPK3Q9UPE1 567 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 NDUFAF1Q9Y375 327 aa18.24■□□□□ 0.51
RPS28-202ENST00000449223 GABRR3A8MPY1 467 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms