RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 L3MBTL4Q8NA19 623 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 ELP5Q8TE02 316 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 UBE2E3Q969T4 207 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 EPS8L2Q9H6S3 715 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 PRDM9Q9NQV7 894 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 STMN3Q9NZ72 180 aa13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 TNPO3Q9Y5L0 923 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-204ENST00000449062 H0YIV9 168 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 MAN1A2O60476 641 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 GFAPP14136 432 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 GNLYP22749 145 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ATP5A1P25705 553 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 PIK3CBP42338 1070 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 GPR143P51810 404 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 MTTPP55157 894 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 LIM2P55344 173 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 RAB38P57729 211 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 SLC26A5P58743 744 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 AP2B1P63010 937 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF169Q14929 603 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 EXT1Q16394 746 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 BTBD16Q32M84 506 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 TMEM35AQ53FP2 167 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 LIPJQ5W064 366 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 MED27Q6P2C8 311 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 KLC3Q6P597 504 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 GOLGA7Q7Z5G4 137 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ATCAYQ86WG3 371 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ARMC10Q8N2F6 343 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 RNF175Q8N4F7 328 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 MZB1Q8WU39 189 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 CCT6BQ92526 530 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 FAR2Q96K12 515 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 SERINC2Q96SA4 455 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 LPAR4Q99677 370 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 MRPL57Q9BQC6 102 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 TBCDQ9BTW9 1192 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ILKAPQ9H0C8 392 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 IPPKQ9H8X2 491 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ZBTB26Q9HCK0 441 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 FETUBQ9UGM5 382 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 DAPP1Q9UN19 280 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 PPIEQ9UNP9 301 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 MMACHCQ9Y4U1 282 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 COPG1Q9Y678 874 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 IKBKGQ9Y6K9 419 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 CENPEQ02224 2701 aa13.19□□□□□ -0.3
RTFDC1-204ENST00000449062 ICE1Q9Y2F5 2266 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 EXOC1LA0A1B0GW35 172 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 A8MUI8 341 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 OR7A17O14581 309 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 STX16O14662 325 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 B3GALT2O43825 422 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 UGDHO60701 494 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 VPS4BO75351 444 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 TGFB1P01137 390 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 CERS1P27544 350 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 SERPINB1P30740 379 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 HPDP32754 393 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 HSD17B7P56937 341 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 GTF2H2Q13888 395 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 TSNAXIP1Q2TAA8 658 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 ACER2Q5QJU3 275 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 GTF2H2CQ6P1K8 395 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 TRIM40Q6P9F5 258 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 SH2D5Q6ZV89 423 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 PTGR2Q8N8N7 351 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 OR1N1Q8NGS0 311 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 HUS1BQ8NHY5 278 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 WDR20Q8TBZ3 569 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 CMTM7Q96FZ5 175 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 NTMT1Q9BV86 223 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 C1QTNF3Q9BXJ4 246 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 ZNF717Q9BY31 904 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 OR51B5Q9H339 312 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 LYRM4Q9HD34 91 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 ADGRE2Q9UHX3 823 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 VPS4AQ9UN37 437 aa13.18□□□□□ -0.3
RTFDC1-204ENST00000449062 NOTCH2Q04721 2471 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 A0A1B0GTL3 188 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 PSMD12O00232 456 aaPredicted RBP13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 PPP6CO00743 305 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 CTNSO60931 367 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 ARFIP1P53367 373 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 LGSNQ5TDP6 509 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 ABHD17BQ5VST6 288 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 FCRLBQ6BAA4 426 aa13.17□□□□□ -0.3
RTFDC1-204ENST00000449062 CHSY3Q70JA7 882 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms