RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 MAPK1P28482 360 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 TPP2P29144 1249 aaPredicted RBP16.49■□□□□ 0.23
SGCE-206ENST00000445866 TIA1P31483 386 aaKnown RBP eCLIP16.49■□□□□ 0.23
SGCE-206ENST00000445866 MAPK12P53778 367 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 ERVK-8P63133 956 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 OLR1P78380 273 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 DCDP81605 110 aaKnown RBP16.49■□□□□ 0.23
SGCE-206ENST00000445866 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 ZCCHC7Q8N3Z6 543 aaKnown RBP16.49■□□□□ 0.23
SGCE-206ENST00000445866 OR5T3Q8NGG3 340 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.49■□□□□ 0.23
SGCE-206ENST00000445866 MCM8Q9UJA3 840 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 FBXW2Q9UKT8 454 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 DLGAP4Q9Y2H0 992 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 AK5Q9Y6K8 562 aa16.49■□□□□ 0.23
SGCE-206ENST00000445866 A0A0A6YYD5 115 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 CHST10O43529 356 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 TMPRSS11DO60235 418 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 NCF2P19878 526 aaPredicted RBP16.48■□□□□ 0.23
SGCE-206ENST00000445866 SPINK2P20155 84 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 AGXTP21549 392 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 DIO3P55073 304 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 MAT1AQ00266 395 aaKnown RBP16.48■□□□□ 0.23
SGCE-206ENST00000445866 RPS6KA2Q15349 733 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 GPR180Q86V85 440 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 PROKR1Q8TCW9 393 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 GBP5Q96PP8 586 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 NPLQ9BXD5 320 aaPredicted RBP16.48■□□□□ 0.23
SGCE-206ENST00000445866 B3GNT4Q9C0J1 378 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 NRSN2Q9GZP1 204 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 CLK4Q9HAZ1 481 aaKnown RBP16.48■□□□□ 0.23
SGCE-206ENST00000445866 NOP53Q9NZM5 478 aaKnown RBP16.48■□□□□ 0.23
SGCE-206ENST00000445866 FOXJ2Q9P0K8 574 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 HCN3Q9P1Z3 774 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 KLK13Q9UKR3 277 aa16.48■□□□□ 0.23
SGCE-206ENST00000445866 TMEM184BQ9Y519 407 aaPredicted RBP16.48■□□□□ 0.23
SGCE-206ENST00000445866 TRABD2BA6NFA1 517 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 SCELO95171 688 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 SLC5A2P31639 672 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 CAMK2BQ13554 666 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 NKAIN1Q4KMZ8 207 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 OGFOD2Q6N063 350 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 C6orf15Q6UXA7 325 aaPredicted RBP16.47■□□□□ 0.23
SGCE-206ENST00000445866 RIPOR1Q6ZS17 1223 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 LIX1Q8N485 282 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 GALNT6Q8NCL4 622 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 CDC26Q8NHZ8 85 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 C16orf78Q8WTQ4 265 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 C10orf82Q8WW14 230 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 STON2Q8WXE9 905 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 MAPKAP1Q9BPZ7 522 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 TRIM33Q9UPN9 1127 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 ASB4Q9Y574 426 aa16.47■□□□□ 0.23
SGCE-206ENST00000445866 GUCY1B2O75343 617 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 ALDOCP09972 364 aaKnown RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 CCNYL3P0C7X3 344 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 PIM1P11309 404 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 G6PDP11413 515 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 PRPS2P11908 318 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 FBLP22087 321 aaKnown RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 TACR1P25103 407 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 RORAP35398 523 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 LIM2P55344 173 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 TAS2R50P59544 299 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 SYT16Q17RD7 645 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 ARHGAP40Q5TG30 622 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 GKAP1Q5VSY0 366 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 METTL21CQ5VZV1 264 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 MRM1Q6IN84 353 aaKnown RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 DSELQ8IZU8 1212 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 OR51Q1Q8NH59 317 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 BCAS4Q8TDM0 211 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 MR1Q95460 341 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 TM4SF18Q96CE8 201 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 MARK4Q96L34 752 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 FCRL1Q96LA6 429 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 LRFN5Q96NI6 719 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 TSSK3Q96PN8 268 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 SCNM1Q9BWG6 230 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 AKIRIN1Q9H9L7 192 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 LYRM4Q9HD34 91 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 LYARQ9NX58 379 aaKnown RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 KCMF1Q9P0J7 381 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 TRPC4Q9UBN4 977 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 HEY2Q9UBP5 337 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 PADI1Q9ULC6 663 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 TEX51A0A1B0GUA7 166 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 NDUFAB1O14561 156 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 ITGAXP20702 1163 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 TLX1P31314 330 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 TRA2BP62995 288 aaKnown RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 DSG2Q14126 1118 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 MLIPQ5VWP3 458 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 FAM199XQ6PEV8 388 aaPredicted RBP16.46■□□□□ 0.23
SGCE-206ENST00000445866 CA13Q8N1Q1 262 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 EFCAB3Q8N7B9 438 aa16.46■□□□□ 0.23
SGCE-206ENST00000445866 CLHC1Q8NHS4 586 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms