RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 SLC9A5Q14940 896 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 KIAA0040Q15053 153 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 SLC9B1Q4ZJI4 515 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 RFTN2Q52LD8 501 aaPredicted RBP14.94□□□□□ -0.02
USP40-206ENST00000443711 ARHGAP40Q5TG30 622 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 NOXRED1Q6NXP6 359 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 CYP20A1Q6UW02 462 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 ZNF793Q6ZN11 406 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 ACAD11Q709F0 780 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 LARP4Q71RC2 724 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP40-206ENST00000443711 CPLX4Q7Z7G2 160 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 PARP9Q8IXQ6 854 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 ESX1Q8N693 406 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 ACTRT2Q8TDY3 377 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.94□□□□□ -0.02
USP40-206ENST00000443711 C11orf24Q96F05 449 aaPredicted RBP14.94□□□□□ -0.02
USP40-206ENST00000443711 THOC1Q96FV9 657 aaKnown RBP14.94□□□□□ -0.02
USP40-206ENST00000443711 MAELQ96JY0 434 aaKnown RBP14.94□□□□□ -0.02
USP40-206ENST00000443711 LYRM4Q9HD34 91 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 LYARQ9NX58 379 aaKnown RBP14.94□□□□□ -0.02
USP40-206ENST00000443711 GIMAP2Q9UG22 337 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 MCM8Q9UJA3 840 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 ACSL6Q9UKU0 697 aa14.94□□□□□ -0.02
USP40-206ENST00000443711 A0A0A6YYD5 115 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 GNG14A0A1W2PPG7 69 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 SRRM3A6NNA2 597 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 PCDH7O60245 1069 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 GUCY1B2O75343 617 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 ANXA4P09525 319 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 FAM58BPP0C7Q3 252 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 PRR35P0CG20 571 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 ITGAXP20702 1163 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 TPP2P29144 1249 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 MAPK12P53778 367 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 RPL38P63173 70 aaKnown RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 RAE1P78406 368 aaKnown RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 EMX2Q04743 252 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 NXNQ6DKJ4 435 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 TIPARPQ7Z3E1 657 aaKnown RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 NLGN4XQ8N0W4 816 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 CA13Q8N1Q1 262 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 AMER3Q8N944 861 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 FNDC5Q8NAU1 212 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 NLGN4YQ8NFZ3 816 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 OR5T3Q8NGG3 340 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 OR51Q1Q8NH59 317 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 CEP70Q8NHQ1 597 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 RFWD2Q8NHY2 731 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 STON2Q8WXE9 905 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 CCDC28BQ9BUN5 200 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 YIPF2Q9BWQ6 316 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 HCN3Q9P1Z3 774 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 IFT80Q9P2H3 777 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 GPN3Q9UHW5 284 aaPredicted RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 DCTN4Q9UJW0 460 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 EIF3LQ9Y262 564 aaKnown RBP14.93□□□□□ -0.02
USP40-206ENST00000443711 MAP4K5Q9Y4K4 846 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 SPACA6W5XKT8 324 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 SCN2AQ99250 2005 aa14.93□□□□□ -0.02
USP40-206ENST00000443711 A0A0G2JND7 137 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 TEX51A0A1B0GUA7 166 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 C9J4A7 227 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 TMPRSS11DO60235 418 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 RAD1O60671 282 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 DNAJB6O75190 326 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 GBAP04062 536 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 CD63P08962 238 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 RNH1P13489 461 aaKnown RBP14.92□□□□□ -0.02
USP40-206ENST00000443711 ACPPP15309 386 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 DRD4P21917 467 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 IL10P22301 178 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 GSTM5P46439 218 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 LIM2P55344 173 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 TRA2BP62995 288 aaKnown RBP14.92□□□□□ -0.02
USP40-206ENST00000443711 ERVK-8P63133 956 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 OLR1P78380 273 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 SHC2P98077 582 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 MAT1AQ00266 395 aaKnown RBP14.92□□□□□ -0.02
USP40-206ENST00000443711 TBC1D25Q3MII6 688 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 MRM1Q6IN84 353 aaKnown RBP14.92□□□□□ -0.02
USP40-206ENST00000443711 OGFOD2Q6N063 350 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 CGB2Q6NT52 195 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 ZNF517Q6ZMY9 492 aaPredicted RBP14.92□□□□□ -0.02
USP40-206ENST00000443711 OVCH1Q7RTY7 1134 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 SPATA19Q7Z5L4 167 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 GPR180Q86V85 440 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 ADAMTS18Q8TE60 1221 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 FKBP10Q96AY3 582 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 FCRL1Q96LA6 429 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 EBPLQ9BY08 206 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 CHST8Q9H2A9 424 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 KCNK13Q9HB14 408 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 MKKSQ9NPJ1 570 aaPredicted RBP14.92□□□□□ -0.02
USP40-206ENST00000443711 TCF7L2Q9NQB0 619 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 SLC22A11Q9NSA0 550 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 MS4A12Q9NXJ0 267 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 KCMF1Q9P0J7 381 aa14.92□□□□□ -0.02
USP40-206ENST00000443711 KLHL14Q9P2G3 628 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms