RNA–Protein interactions for RNA: ENST00000440636.1

SP4-203, Transcript of Sp4 transcription factor, humanhuman

TSL 3

Gene SP4, Length 288 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-203ENST00000440636 SCUBE1Q8IWY4 988 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 CLYBLQ8N0X4 340 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 CA13Q8N1Q1 262 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 CEP112Q8N8E3 955 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 C2CD4AQ8NCU7 369 aaPredicted RBP12.15□□□□□ -0.46
SP4-203ENST00000440636 MNS1Q8NEH6 495 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 OR5M3Q8NGP4 307 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 SLC5A11Q8WWX8 675 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 NINJ1Q92982 152 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 NCLNQ969V3 563 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 VMP1Q96GC9 406 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 PBKQ96KB5 322 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 SIGLEC10Q96LC7 697 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 FAM167BQ9BTA0 163 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 SLC24A3Q9HC58 644 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 HOMER3Q9NSC5 361 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 IARS2Q9NSE4 1012 aaKnown RBP12.15□□□□□ -0.46
SP4-203ENST00000440636 PNPLA3Q9NST1 481 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 ARL15Q9NXU5 204 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 SNX12Q9UMY4 172 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 YARS2Q9Y2Z4 477 aaKnown RBP12.15□□□□□ -0.46
SP4-203ENST00000440636 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 MMACHCQ9Y4U1 282 aa12.15□□□□□ -0.46
SP4-203ENST00000440636 A0A0G2JMM0 328 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 A0A1W2PPB8 328 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 A0A1W2PRS3 328 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 URADA6NGE7 173 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 FAM166BA8MTA8 275 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 KIR3DP1A8MWS1 328 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 TGFBR3LH3BV60 316 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 ACVR2AP27037 513 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 PPP2R1BP30154 601 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 DLX5P56178 289 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 FOLH1Q04609 750 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 CSHL1Q14406 222 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 WHAMMP3Q1A5X7 153 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 TTC27Q6P3X3 843 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 C16orf47Q6ZP98 133 aaPredicted RBP12.14□□□□□ -0.47
SP4-203ENST00000440636 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
SP4-203ENST00000440636 TRPV3Q8NET8 790 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 OR2M7Q8NG81 312 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 OR5M9Q8NGP3 310 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 FBXL8Q96CD0 374 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 TSNARE1Q96NA8 513 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 OSBPL9Q96SU4 736 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 NAP1L3Q99457 506 aaPredicted RBP12.14□□□□□ -0.47
SP4-203ENST00000440636 TTYH2Q9BSA4 534 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 TTTY12Q9BZ98 90 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 PNO1Q9NRX1 252 aaKnown RBP12.14□□□□□ -0.47
SP4-203ENST00000440636 CCM2LQ9NUG4 571 aaPredicted RBP12.14□□□□□ -0.47
SP4-203ENST00000440636 RNF14Q9UBS8 474 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 ERVK-11Q9UQG0 969 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 MAD1L1Q9Y6D9 718 aa12.14□□□□□ -0.47
SP4-203ENST00000440636 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 A0A0G2JNJ9 132 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 OR14I1A6ND48 311 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 A8MVJ9 347 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 ACOT7O00154 380 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 CTAG2O75638 210 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 OR2J2O76002 312 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 ZFAND5O76080 213 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 GLSO94925 669 aaPredicted RBP12.13□□□□□ -0.47
SP4-203ENST00000440636 OR6B1O95007 311 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 GUCA1CO95843 209 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 IGHG3P01860 377 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 SERPINA6P08185 405 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 GLI4P10075 376 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 KLK2P20151 261 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 ZFP36L2P47974 494 aaKnown RBP12.13□□□□□ -0.47
SP4-203ENST00000440636 PLGLB1Q02325 96 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 XKR6Q5GH73 641 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 RGS9BPQ6ZS82 235 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 GPALPP1Q8IXQ4 340 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 MMP21Q8N119 569 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 CHDHQ8NE62 594 aaPredicted RBP12.13□□□□□ -0.47
SP4-203ENST00000440636 ATL1Q8WXF7 558 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 ASB15Q8WXK1 588 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 CAPZA3Q96KX2 299 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 SMC6Q96SB8 1091 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 LIN28AQ9H9Z2 209 aaKnown RBP12.13□□□□□ -0.47
SP4-203ENST00000440636 PELI2Q9HAT8 420 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 HPF1Q9NWY4 346 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 DNAJB12Q9NXW2 375 aaKnown RBP12.13□□□□□ -0.47
SP4-203ENST00000440636 Q9UFV3 132 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 LIPGQ9Y5X9 500 aa12.13□□□□□ -0.47
SP4-203ENST00000440636 A0A1B0GVC2 190 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 FIGNL2A6NMB9 653 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 CES2O00748 559 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 BCKDKO14874 412 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 AHSGP02765 367 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 CXCR5P32302 372 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 SOX3P41225 446 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 HNRNPFP52597 415 aaKnown RBP12.12□□□□□ -0.47
SP4-203ENST00000440636 PGGT1BP53609 377 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 HSD17B7P56937 341 aa12.12□□□□□ -0.47
SP4-203ENST00000440636 IL2P60568 153 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms