RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 NXNL1Q96CM4 212 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 TAAR6Q96RI8 345 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 SERINC2Q96SA4 455 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 AICDAQ9GZX7 198 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 TSPYL1Q9H0U9 437 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 CDCP1Q9H5V8 836 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 NECTIN3Q9NQS3 549 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 KLHL1Q9NR64 748 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 SNX15Q9NRS6 342 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 PNO1Q9NRX1 252 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 IGSF5Q9NSI5 407 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 ZDHHC18Q9NUE0 388 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 COPG2Q9UBF2 871 aa18.61■□□□□ 0.57
SHROOM1-204ENST00000440118 K7EPI3 171 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 FCHO1O14526 889 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 MYO1DO94832 1006 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 ACSL3O95573 720 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 INHBAP08476 426 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 CTAGE8P0CG41 777 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 EPB42P16452 691 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 TYK2P29597 1187 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 EEF1DP29692 281 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 KCNC1P48547 511 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 IRF9Q00978 393 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 PMP22Q01453 160 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 C4orf17Q53FE4 359 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 RPS19BP1Q86WX3 136 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 CTAGE4Q8IX94 777 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 LGI4Q8N135 537 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 TMEM178AQ8NBL3 297 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 FAM98AQ8NCA5 519 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 SRFBP1Q8NEF9 429 aaKnown RBP18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 WDR34Q96EX3 536 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 KCNC2Q96PR1 638 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 ATOH8Q96SQ7 321 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 FMO2Q99518 471 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 DEFB126Q9BYW3 111 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 ROGDIQ9GZN7 287 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 VPS11Q9H270 941 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 NINJ2Q9NZG7 142 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 ASB1Q9Y576 335 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 SPACA6W5XKT8 324 aa18.6■□□□□ 0.57
SHROOM1-204ENST00000440118 A0A096LPK6 155 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 IGKV3D-11A0A0A0MRZ8 115 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 LRRTM2O43300 516 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 MLYCDO95822 493 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 LDLRP01130 860 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 C2P06681 752 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 ARL1P40616 181 aaPredicted RBP18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 HSD17B7P56937 341 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 KCNK10P57789 538 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 DDX39BQ13838 428 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 RUNX2Q13950 521 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 TBCCQ15814 346 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 MED27Q6P2C8 311 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 VN1R5Q7Z5H4 357 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 CLNKQ7Z7G1 428 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 DNAJB8Q8NHS0 232 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 ELP5Q8TE02 316 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 UBTD2Q8WUN7 234 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 F2RL3Q96RI0 385 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 CENPKQ9BS16 269 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 ACSS3Q9H6R3 686 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 SEC14L3Q9UDX4 400 aa18.59■□□□□ 0.57
SHROOM1-204ENST00000440118 TRBV11-1A0A0K0K1C0 115 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 MAN1A2O60476 641 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 SH3BGRLO75368 114 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 UNC5CO95185 931 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 IFNA16P05015 189 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CD22P20273 847 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 SERPINB1P30740 379 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CD96P40200 585 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CLCN2P51788 898 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 RAP1GDS1P52306 607 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 PHEXP78562 749 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 RBPJQ06330 500 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 PFKFB4Q16877 469 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 ADPRMQ3LIE5 342 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 ABHD17CQ6PCB6 329 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF595Q8IYB9 648 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CENPLQ8N0S6 344 aaPredicted RBP18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 MMGT1Q8N4V1 131 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 TEX9Q8N6V9 391 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 B3GNT7Q8NFL0 401 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 RHEBL1Q8TAI7 183 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 SIGLEC12Q96PQ1 595 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CCDC77Q9BR77 488 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CDC42EP4Q9H3Q1 356 aaKnown RBP18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 LRFN1Q9P244 771 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 CPSF2Q9P2I0 782 aaKnown RBP18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 FBXW2Q9UKT8 454 aa18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 ZNF490Q9ULM2 529 aaPredicted RBP18.58■□□□□ 0.56
SHROOM1-204ENST00000440118 A0A1B0GUH1 482 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 SYNDIG1LA6NDD5 238 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 KIF2AO00139 706 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 PRAMEF4O60810 478 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 TPP2P29144 1249 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 SSR2P43308 183 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 TDGF1P3P51864 188 aa18.57■□□□□ 0.56
SHROOM1-204ENST00000440118 LIM2P55344 173 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms