RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 AGAP14A8MT82 685 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 H0Y3Z8 333 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 PSMA7O14818 248 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 SCAMP2O15127 329 aaKnown RBP10.03□□□□□ -0.8
RTN4-211ENST00000438462 ZFAND5O76080 213 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 LY6HO94772 140 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 GNA14O95837 355 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 CD3EP07766 207 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 NUDT17P0C025 328 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 RBP3P10745 1247 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 PPP3CBP16298 524 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 MAOAP21397 527 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 GGT5P36269 586 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 CSE1LP55060 971 aaKnown RBP10.03□□□□□ -0.8
RTN4-211ENST00000438462 BTG2P78543 158 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 CDR2Q01850 454 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 TYRO3Q06418 890 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 RAB35Q15286 201 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 DNAJC21Q5F1R6 531 aaKnown RBP10.03□□□□□ -0.8
RTN4-211ENST00000438462 DENND5AQ6IQ26 1287 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 REC114Q7Z4M0 266 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 ADGRE4PQ86SQ3 457 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 ZNF677Q86XU0 584 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 PHF13Q86YI8 300 aaPredicted RBP10.03□□□□□ -0.8
RTN4-211ENST00000438462 CILP2Q8IUL8 1156 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 SLC25A41Q8N5S1 370 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 CFAP61Q8NHU2 1237 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 HEXDCQ8WVB3 486 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 ABTB1Q969K4 478 aaPredicted RBP10.03□□□□□ -0.8
RTN4-211ENST00000438462 CCDC138Q96M89 665 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 PIMREGQ9BSJ6 248 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 FAIMQ9NVQ4 179 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 RMND1Q9NWS8 449 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 HACD3Q9P035 362 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 RNF112Q9ULX5 631 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 USP22Q9UPT9 525 aa10.03□□□□□ -0.8
RTN4-211ENST00000438462 RUVBL2Q9Y230 463 aaKnown RBP10.03□□□□□ -0.8
RTN4-211ENST00000438462 IGLV3-16A0A075B6K0 115 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 ESYT3A0FGR9 886 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 PPP1R12AO14974 1030 aaPredicted RBP10.02□□□□□ -0.81
RTN4-211ENST00000438462 RPN2P04844 631 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 PEPDP12955 493 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 EZRP15311 586 aaKnown RBP10.02□□□□□ -0.81
RTN4-211ENST00000438462 ZNF23P17027 643 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 EPHA1P21709 976 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 IL10P22301 178 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 JAK1P23458 1154 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 LOXL3P58215 753 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 SIRPAP78324 504 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 MEF2AQ02078 507 aaPredicted RBP10.02□□□□□ -0.81
RTN4-211ENST00000438462 SRSF4Q08170 494 aaKnown RBP10.02□□□□□ -0.81
RTN4-211ENST00000438462 KLF1Q13351 362 aaPredicted RBP10.02□□□□□ -0.81
RTN4-211ENST00000438462 C8orf34Q49A92 452 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 IQCCQ4KMZ1 466 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 SIRPB2Q5JXA9 342 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 NCBP2-AS2Q69YL0 99 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 MICALCLQ6ZW33 695 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 GRAMD2AQ8IUY3 354 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 ALKBH8Q96BT7 664 aaKnown RBP10.02□□□□□ -0.81
RTN4-211ENST00000438462 PCDHB18PQ96TA0 734 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 MACROD1Q9BQ69 325 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 ARNT2Q9HBZ2 717 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 ANKHQ9HCJ1 492 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 HOMER3Q9NSC5 361 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 ZDHHC3Q9NYG2 299 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 UBP1Q9NZI7 540 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 MYO1AQ9UBC5 1043 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 ARL5AQ9Y689 179 aa10.02□□□□□ -0.81
RTN4-211ENST00000438462 M0QZ24 198 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 RNF8O76064 485 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 LRATO95237 230 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 ACSL3O95573 720 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 CYP1A2P05177 515 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 GPR143P51810 404 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 NDUFA8P51970 172 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 HK2P52789 917 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 XIAPP98170 497 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 PNOCQ13519 176 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 EXOC3L2Q2M3D2 409 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 KLHL10Q6JEL2 608 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 SHQ1Q6PI26 577 aaKnown RBP10.01□□□□□ -0.81
RTN4-211ENST00000438462 QSOX2Q6ZRP7 698 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 PLD3Q8IV08 490 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 FBXO15Q8NCQ5 510 aaPredicted RBP10.01□□□□□ -0.81
RTN4-211ENST00000438462 OR4K2Q8NGD2 314 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 KCTD4Q8WVF5 259 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 TBC1D20Q96BZ9 403 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 UCN2Q96RP3 112 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 G6PC3Q9BUM1 346 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 TRIM2Q9C040 744 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 SLC25A51Q9H1U9 297 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 PROK2Q9HC23 129 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 PCDH18Q9HCL0 1135 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 MRPS30Q9NP92 439 aaKnown RBP10.01□□□□□ -0.81
RTN4-211ENST00000438462 NAALAD2Q9Y3Q0 740 aa10.01□□□□□ -0.81
RTN4-211ENST00000438462 IGKV3D-11A0A0A0MRZ8 115 aa10□□□□□ -0.81
RTN4-211ENST00000438462 LRP5LA4QPB2 252 aa10□□□□□ -0.81
RTN4-211ENST00000438462 F8VZ95 297 aa10□□□□□ -0.81
RTN4-211ENST00000438462 G3V4G9 280 aa10□□□□□ -0.81
RTN4-211ENST00000438462 HAT1O14929 419 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms