RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 OR52B2Q96RD2 323 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 OR51B5Q9H339 312 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 SMURF1Q9HCE7 757 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 CLPXO76031 633 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 EDNRBP24530 442 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 KIAA0319Q5VV43 1072 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 PLXDC1Q8IUK5 500 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF565Q8N9K5 539 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 OR6N1Q8NGY5 312 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 GRPEL2Q8TAA5 225 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 BHMG1C9JSJ3 638 aaPredicted RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 LILRB3O75022 631 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 PLP2Q04941 152 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 C14orf80Q86SX3 495 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 LRRC25Q8N386 305 aaPredicted RBP15.29■□□□□ 0.04
PTPN13-204ENST00000436978 BADQ92934 168 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 MARCH7Q9H992 704 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 TMPRSS11EQ9UL52 423 aa15.29■□□□□ 0.04
PTPN13-204ENST00000436978 OR6C74A6NCV1 312 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 TMEM233B4DJY2 109 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 CDH11P55287 796 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 EGFLAMQ63HQ2 1017 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 RBP7Q96R05 134 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 NAA11Q9BSU3 229 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 METTL8Q9H825 291 aaKnown RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 HCN4Q9Y3Q4 1203 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF878C9JN71 531 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 GSK3BP49841 420 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 FKBP10Q96AY3 582 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 RDH12Q96NR8 316 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 MEAF6Q9HAF1 191 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 CDH10Q9Y6N8 788 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 AK1P00568 194 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 GPX6P59796 221 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 ENY2Q9NPA8 101 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 PLCL2Q9UPR0 1127 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 FAM189A1O60320 539 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF821O75541 412 aaPredicted RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 STATHP02808 62 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 HYAL2Q12891 473 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 TSC22D1Q15714 1073 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 OR5L2Q8NGL0 311 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 S100A16Q96FQ6 103 aaKnown RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 MRGPRX2Q96LB1 330 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 PPM1BO75688 479 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 GDF5P43026 501 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 GPR143P51810 404 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 ATG9BQ674R7 924 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 ZBTB46Q86UZ6 589 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 ZSWIM9Q86XI8 627 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 C1GALT1C1LP0DN25 315 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 RAB28P51157 221 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 MECP2P51608 486 aaKnown RBP15.28■□□□□ 0.04
PTPN13-204ENST00000436978 POU4F2Q12837 409 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 JAGN1Q8N5M9 183 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 XYLT2Q9H1B5 865 aa15.28■□□□□ 0.04
PTPN13-204ENST00000436978 C8orf89P0DMQ9 161 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 HNRNPKP61978 463 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF613Q6PF04 617 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF598Q86UK7 904 aaKnown RBP15.27■□□□□ 0.04
PTPN13-204ENST00000436978 C1orf226A1L170 272 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 TRIM64A6NGJ6 449 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 GJE1A6NN92 205 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 J3QLW9 94 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 ZNF19P17023 458 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 CAPZA1P52907 286 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 WDR4P57081 412 aaKnown RBP15.27■□□□□ 0.04
PTPN13-204ENST00000436978 RABEPKQ7Z6M1 372 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 IL4I1Q96RQ9 567 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 AIFM2Q9BRQ8 373 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 TTC34A8MYJ7 566 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 AZGP1P25311 298 aaKnown RBP15.27■□□□□ 0.04
PTPN13-204ENST00000436978 SLC3A1Q07837 685 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 SLAMF1Q13291 335 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 ZFAND4Q86XD8 727 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 SLC22A8Q8TCC7 542 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 DNMT3AQ9Y6K1 912 aaPredicted RBP15.27■□□□□ 0.04
PTPN13-204ENST00000436978 A0A1W2PPL8 197 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 HCRTO43612 131 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 RPP14O95059 124 aaKnown RBP15.27■□□□□ 0.04
PTPN13-204ENST00000436978 GJB5O95377 273 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 OPN1SWP03999 348 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 HLA-DPB1P04440 258 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 EPCAMP16422 314 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 SLC15A1P46059 708 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 MSS51Q4VC12 460 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 RNF111Q6ZNA4 994 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 SHKBP1Q8TBC3 707 aa15.27■□□□□ 0.04
PTPN13-204ENST00000436978 H7BY64 318 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 STC2O76061 302 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 PDYNP01213 254 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 TBPL1P62380 186 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 SEC23BQ15437 767 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 GXYLT1Q4G148 440 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 RNF220Q5VTB9 566 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 PRAP1Q96NZ9 151 aa15.27■□□□□ 0.03
PTPN13-204ENST00000436978 EMC8O43402 210 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms