RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SNF8Q96H20 258 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 NDNQ99608 321 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 HAUS8Q9BT25 410 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 LDAHQ9H6V9 325 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 EXO5Q9H790 373 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 PARVBQ9HBI1 364 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 SAMD15Q9P1V8 674 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 TRMT6Q9UJA5 497 aaKnown RBP13.75□□□□□ -0.21
HDAC8-213ENST00000436675 EDARQ9UNE0 448 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 TLN2Q9Y4G6 2542 aa13.75□□□□□ -0.21
HDAC8-213ENST00000436675 A0A0G2JN53 185 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 TPSB2P20231 275 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 CCND1P24385 295 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 ADSLP30566 484 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-213ENST00000436675 DNASE1L1P49184 302 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 MAN2A2P49641 1150 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 SIX1Q15475 284 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-213ENST00000436675 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 TOR1AIP1Q5JTV8 583 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 FBXW10Q5XX13 1052 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 TBC1D19Q8N5T2 526 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 OR4K1Q8NGD4 311 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 TSNARE1Q96NA8 513 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 OR4K3Q96R72 315 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 AARSD1Q9BTE6 412 aaKnown RBP13.74□□□□□ -0.21
HDAC8-213ENST00000436675 ZFP69BQ9UJL9 534 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 CBLCQ9ULV8 474 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 NINQ8N4C6 2090 aa13.74□□□□□ -0.21
HDAC8-213ENST00000436675 CSPG4Q6UVK1 2322 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 OR14I1A6ND48 311 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 TGFBR3LH3BV60 316 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 GLSO94925 669 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 IGHG3P01860 377 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 C8GP07360 202 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 HIST1H2AGP0C0S8 130 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 SCTRP47872 440 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 HNRNPFP52597 415 aaKnown RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 BTN3A2P78410 334 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 DHX9Q08211 1270 aaKnown RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 BMPR2Q13873 1038 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 CSHL1Q14406 222 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 CCNG2Q16589 344 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 WLSQ5T9L3 541 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 NIPAL1Q6NVV3 410 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 PAMR1Q6UXH9 720 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 CLEC9AQ6UXN8 241 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 C4orf22Q6V702 233 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 RGS9BPQ6ZS82 235 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 GK5Q6ZS86 529 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 CLNKQ7Z7G1 428 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 MYO1HQ8N1T3 1032 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 FAM109AQ8N4B1 249 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 ANKRD53Q8N9V6 530 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 NEIL2Q969S2 332 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 RASL10BQ96S79 203 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 FAM173AQ9BQD7 235 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 SARGQ9BW04 601 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 AICDAQ9GZX7 198 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 PRTFDC1Q9NRG1 225 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 C20orf96Q9NUD7 363 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
HDAC8-213ENST00000436675 ARL15Q9NXU5 204 aa13.73□□□□□ -0.21
HDAC8-213ENST00000436675 COL6A5A8TX70 2615 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 A0A1B0GVC2 190 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 GOLGA8MH3BSY2 632 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 AQP7O14520 342 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 WDR1O75083 606 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 ATE1O95260 518 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 GUCA1CO95843 209 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 RAF1P04049 648 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SMIM10L1P0DMW3 83 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 CNR1P21554 472 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SAT1P21673 171 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 RGS4P49798 205 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 GPR143P51810 404 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 CDK16Q00536 496 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 TIAL1Q01085 375 aaKnown RBP eCLIP13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SLC13A2Q13183 592 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 RUNX2Q13950 521 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 KEAP1Q14145 624 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SLC10A1Q14973 349 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 DEFB113Q30KQ7 82 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 FLYWCH1Q4VC44 716 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 NDUFAF5Q5TEU4 345 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 DUPD1Q68J44 220 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 PAQR3Q6TCH7 311 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 FAM47EQ6ZV65 393 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 CHSY3Q70JA7 882 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 CAMKMTQ7Z624 323 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 CAND1Q86VP6 1230 aaKnown RBP13.72□□□□□ -0.21
HDAC8-213ENST00000436675 GPALPP1Q8IXQ4 340 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 TMEM52Q8NDY8 209 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SLC5A11Q8WWX8 675 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 MBD6Q96DN6 1003 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms