RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 TRMT11Q7Z4G4 463 aaKnown RBP3.3□□□□□ -1.88
LINC00353-201ENST00000435401 UNC45BQ8IWX7 931 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 ZNF440Q8IYI8 595 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 MAPK15Q8TD08 544 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 CNRIP1Q96F85 164 aaPredicted RBP3.3□□□□□ -1.88
LINC00353-201ENST00000435401 PDLIM5Q96HC4 596 aaKnown RBP3.3□□□□□ -1.88
LINC00353-201ENST00000435401 POM121L2Q96KW2 1035 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 DGCR6LQ9BY27 220 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 PITPNM3Q9BZ71 974 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 RNPEPL1Q9HAU8 725 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 GPR173Q9NS66 373 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 PNPLA3Q9NST1 481 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 FAM212BQ9NTI7 297 aaPredicted RBP3.3□□□□□ -1.88
LINC00353-201ENST00000435401 SPG21Q9NZD8 308 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 PSORS1C1Q9UIG5 152 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 FBXW2Q9UKT8 454 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 ITM2BQ9Y287 266 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 SNX5Q9Y5X3 404 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 RICTORQ6R327 1708 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 HECW1Q76N89 1606 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 MADDQ8WXG6 1647 aa3.3□□□□□ -1.88
LINC00353-201ENST00000435401 NPHP3Q7Z494 1330 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 C13orf42A0A1B0GVH6 325 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 CCDC162PA2VCL2 907 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 TRIM64A6NGJ6 449 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 TRIM64BA6NI03 449 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 SCO2O43819 266 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 LETM1O95202 739 aaPredicted RBP3.29□□□□□ -1.88
LINC00353-201ENST00000435401 ZSCAN5DPP0CG00 497 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 VDRP11473 427 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 SELEP16581 610 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 AADACP22760 399 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 HNF4AP41235 474 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 KHKP50053 298 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 UCP2P55851 309 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 KIAA1024LP59773 190 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 GUCY2DQ02846 1103 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 AP1B1Q10567 949 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 MORF4L2Q15014 288 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 TAB1Q15750 504 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 FAM189A2Q15884 450 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 HFEQ30201 348 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 FAM106AQ4KMX7 169 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 AARDQ4LEZ3 155 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 ZNF789Q5FWF6 425 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 ATP1A1-AS1Q5TC04 95 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 AGAP6Q5VW22 663 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 CES4AQ5XG92 561 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 FIP1L1Q6UN15 594 aaKnown RBP3.29□□□□□ -1.88
LINC00353-201ENST00000435401 METTL7BQ6UX53 244 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 LAX1Q8IWV1 398 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 TEX26Q8N6G2 289 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 CLEC1AQ8NC01 280 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 LPCAT1Q8NF37 534 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 C11orf45Q8TAV5 145 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 SEPT8Q92599 483 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 BCL2L2Q92843 193 aaPredicted RBP3.29□□□□□ -1.88
LINC00353-201ENST00000435401 BPIFA2Q96DR5 249 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 OMA1Q96E52 524 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 ZNF300Q96RE9 604 aaPredicted RBP3.29□□□□□ -1.88
LINC00353-201ENST00000435401 NACAP1Q9BZK3 213 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 MTIF3Q9H2K0 278 aaKnown RBP3.29□□□□□ -1.88
LINC00353-201ENST00000435401 ZNF510Q9Y2H8 683 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 CSNK1G3Q9Y6M4 447 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 EFCAB5A4FU69 1503 aa3.29□□□□□ -1.88
LINC00353-201ENST00000435401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.29□□□□□ -1.88
LINC00353-201ENST00000435401 BCORL1Q5H9F3 1711 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SLCO1B7G3V0H7 640 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 H7C423 109 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SLC1A7O00341 560 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SIGLEC5O15389 551 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 TLX2O43763 284 aaPredicted RBP3.28□□□□□ -1.88
LINC00353-201ENST00000435401 RTN2O75298 545 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SORBS2O94875 1100 aaKnown RBP3.28□□□□□ -1.88
LINC00353-201ENST00000435401 NUDT17P0C025 328 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 EZRP15311 586 aaKnown RBP3.28□□□□□ -1.88
LINC00353-201ENST00000435401 DPEP1P16444 411 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 OR3A3P47888 321 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 YBEYP58557 167 aaPredicted RBP3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SLC34A1Q06495 639 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 PPA1Q15181 289 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 RPS6KA1Q15418 735 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 MAPK11Q15759 364 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 HLA-BQ31612 363 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 IFI44LQ53G44 452 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 FGD3Q5JSP0 725 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SPANXN4Q5MJ08 99 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 KCTD11Q693B1 232 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SLC27A4Q6P1M0 643 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SERPINA12Q8IW75 414 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 CNTN4Q8IWV2 1026 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 THEM5Q8N1Q8 247 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SPC24Q8NBT2 197 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 ZNF519Q8TB69 540 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 MGARPQ8TDB4 240 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 ATP8B4Q8TF62 1192 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SMPDL3AQ92484 453 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 CASP10Q92851 521 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SLC35C1Q96A29 364 aa3.28□□□□□ -1.88
LINC00353-201ENST00000435401 SYT15Q9BQS2 421 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms