RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 LAPTM5Q13571 262 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 PDK4Q16654 411 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 SLC25A25Q6KCM7 469 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 RAPH1Q70E73 1250 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 ZNF227Q86WZ6 799 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 TMEM52Q8NDY8 209 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 ARMC2Q8NEN0 867 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 NXNL1Q96CM4 212 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 F2RL3Q96RI0 385 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 EFCAB11Q9BUY7 163 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 KLHL1Q9NR64 748 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 KCMF1Q9P0J7 381 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 SEC14L3Q9UDX4 400 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 PPIEQ9UNP9 301 aaKnown RBP16.72■□□□□ 0.27
CPNE1-213ENST00000434795 ACOT9Q9Y305 439 aa16.72■□□□□ 0.27
CPNE1-213ENST00000434795 TGFBR3LH3BV60 316 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 B3GALT2O43825 422 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 CCNT2O60583 730 aaKnown RBP16.71■□□□□ 0.27
CPNE1-213ENST00000434795 UNC5CO95185 931 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 SP1P08047 785 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 LTA4HP09960 611 aaKnown RBP16.71■□□□□ 0.27
CPNE1-213ENST00000434795 MTHFD2P13995 350 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 CD46P15529 392 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 TPP2P29144 1249 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-213ENST00000434795 HNRNPFP52597 415 aaKnown RBP16.71■□□□□ 0.27
CPNE1-213ENST00000434795 HSD17B7P56937 341 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 RAB38P57729 211 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 IRF8Q02556 426 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 EFTUD2Q15029 972 aaKnown RBP eCLIP16.71■□□□□ 0.274e-8■■■■■ 37.6
CPNE1-213ENST00000434795 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
CPNE1-213ENST00000434795 HIST2H2ACQ16777 129 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-213ENST00000434795 HIST2H2AA3Q6FI13 130 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 APCDD1LQ8NCL9 501 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 SERINC2Q96SA4 455 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 PRTFDC1Q9NRG1 225 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 LRFN1Q9P244 771 aa16.71■□□□□ 0.27
CPNE1-213ENST00000434795 ASPDHA6ND91 283 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 CLDN4O14493 209 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 CTNSO60931 367 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 KERAO60938 352 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 S100BP04271 92 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-213ENST00000434795 C2P06681 752 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 HPDP32754 393 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-213ENST00000434795 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-213ENST00000434795 MTTPP55157 894 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 LIM2P55344 173 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 PER3P56645 1201 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 OC90Q02509 493 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-213ENST00000434795 PAGE2BQ5JRK9 111 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 MROH9Q5TGP6 573 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 C1QL3Q5VWW1 255 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 TRIM40Q6P9F5 258 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 LRRC70Q7Z2Q7 622 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 TBC1D1Q86TI0 1168 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-213ENST00000434795 FJX1Q86VR8 437 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 HORMAD2Q8N7B1 307 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 B3GNT7Q8NFL0 401 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 ZNF473Q8WTR7 871 aaKnown RBP16.7■□□□□ 0.26
CPNE1-213ENST00000434795 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 NUDT4Q9NZJ9 180 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 DAPP1Q9UN19 280 aa16.7■□□□□ 0.26
CPNE1-213ENST00000434795 A0A088AWK7 358 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 K7EPI3 171 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 UBXN8O00124 270 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 ZG16O60844 167 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 ZNF10P21506 573 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 EEF1DP29692 281 aaKnown RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 PPP2R1BP30154 601 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 DCTP40126 519 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 HLCSP50747 726 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 CKAP4Q07065 602 aaKnown RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 SLMAPQ14BN4 828 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 TERF2Q15554 542 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 KRTCAP3Q53RY4 240 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 ZNF787Q6DD87 383 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 GALNTL5Q7Z4T8 443 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 RELL1Q8IUW5 271 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 LAS2Q8IYD9 372 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 CENPLQ8N0S6 344 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 RHEBL1Q8TAI7 183 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 KCTD4Q8WVF5 259 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 EXT2Q93063 718 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 MRRFQ96E11 262 aaKnown RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 GPR78Q96P69 363 aa16.69■□□□□ 0.26
CPNE1-213ENST00000434795 PNO1Q9NRX1 252 aaKnown RBP16.69■□□□□ 0.26
CPNE1-213ENST00000434795 A0A087X1B8 175 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 URI1O94763 535 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-213ENST00000434795 MYO1DO94832 1006 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 CERS1P27544 350 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 MSH2P43246 934 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 CYB561P49447 251 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 CLCN2P51788 898 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 IRF9Q00978 393 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 SLC13A2Q13183 592 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 MAPKAPK3Q16644 382 aa16.68■□□□□ 0.26
CPNE1-213ENST00000434795 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms