RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 MAPK9P45984 424 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 PNLIPRP1P54315 467 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 ZNF658BQ4V348 819 aaPredicted RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 HIST2H2AA3Q6FI13 130 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 FAM71E1Q6IPT2 247 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 TRMT11Q7Z4G4 463 aaKnown RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 NLRP8Q86W28 1048 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 OR9A1PQ8NGU1 263 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 FAM129BQ96TA1 746 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 PIP5K1AQ99755 562 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SGPP1Q9BX95 441 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 OR51E2Q9H255 320 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 MMP27Q9H306 513 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 THSD1Q9NS62 852 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 OGDHLQ9ULD0 1010 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 DUSP12Q9UNI6 340 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SNX8Q9Y5X2 465 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 METTL15A6NJ78 407 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SOD1P00441 154 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 IL3P08700 152 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 CSF2RAP15509 400 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 PTX3P26022 381 aaPredicted RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 UGT2B10P36537 528 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 XCR1P46094 333 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 PTGES3Q15185 160 aaKnown RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 DUSP7Q16829 419 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 CRB2Q5IJ48 1285 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 NXPE4Q6UWF7 544 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 CCDC80Q76M96 950 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 DEPDC4Q8N2C3 294 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 KIAA1958Q8N8K9 716 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 DENND6BQ8NEG7 585 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 B3GNT7Q8NFL0 401 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SLC5A11Q8WWX8 675 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 GEMIN6Q8WXD5 167 aaKnown RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 ROGDIQ9GZN7 287 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 GPBP1L1Q9HC44 474 aaPredicted RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 SACM1LQ9NTJ5 587 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 GIN1Q9NXP7 522 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 HCN4Q9Y3Q4 1203 aa11.29□□□□□ -0.6
CD44-209ENST00000433892 FAM32AQ9Y421 112 aaKnown RBP11.29□□□□□ -0.6
CD44-209ENST00000433892 TRBC2A0A5B9 178 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 DSCR3O14972 297 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 AQP9O43315 295 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 LILRB5O75023 590 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 FKTNO75072 461 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 GADD45GO95257 159 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 RPLP0P05388 317 aaKnown RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 ACRP10323 421 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ITGB8P26012 769 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 IRS1P35568 1242 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 SEPHS1P49903 392 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 RPS26P62854 115 aaKnown RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 NTHL1P78549 312 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ZNF630Q2M218 657 aaPredicted RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 ARMCX4Q5H9R4 360 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 C10orf62Q5T681 223 aaPredicted RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 AGAP7PQ5VUJ5 663 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 USP43Q70EL4 1123 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 AQP11Q8NBQ7 271 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 HPS1Q92902 700 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ITPKCQ96DU7 683 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 WDR34Q96EX3 536 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 COL21A1Q96P44 957 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 IL17FQ96PD4 163 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 PSD2Q9BQI7 771 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 CHCHD6Q9BRQ6 235 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 CENPOQ9BU64 300 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ACAT2Q9BWD1 397 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ANKHQ9HCJ1 492 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 MIEF1Q9NQG6 463 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 SCHIP1Q9P0W5 487 aaPredicted RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 DKK3Q9UBP4 350 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 PLAGL1Q9UM63 463 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 CFAP20Q9Y6A4 193 aaKnown RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 AGAP5A6NIR3 686 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 TBX1O43435 398 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 KDM1AO60341 852 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 UPK1BO75841 260 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 CCNB2O95067 398 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 GASTP01350 101 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 RHOP08100 348 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 SRPRAP08240 638 aaKnown RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 POU1F1P28069 291 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 LIMS1P48059 325 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 RGS6P49758 472 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
CD44-209ENST00000433892 ERVFC1P60507 584 aa11.28□□□□□ -0.6
CD44-209ENST00000433892 ELOAQ14241 798 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms