RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 AMD1P17707 334 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 TACR2P21452 398 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 SDHBP21912 280 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 WNT3P56703 355 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 SRSF11Q05519 484 aaKnown RBP11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 VEZF1Q14119 521 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF792Q3KQV3 632 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 TOR1AIP1Q5JTV8 583 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 CNIH2Q6PI25 160 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 C19orf48Q6RUI8 117 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF852Q6ZMS4 543 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 PHC2Q8IXK0 858 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 ESX1Q8N693 406 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 DNAJC5GQ8N7S2 189 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 GALNT11Q8NCW6 608 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 OR5AK3PQ8NH89 298 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 TMEM121BQ9BXQ6 578 aaPredicted RBP11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 TMEM245Q9H330 911 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 SLC32A1Q9H598 525 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 RBFOX1Q9NWB1 397 aaKnown RBP11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 PLEKHB1Q9UF11 243 aaPredicted RBP11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 ACSL6Q9UKU0 697 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 MAP4K5Q9Y4K4 846 aa11.08□□□□□ -0.64
HMGCS1-202ENST00000433297 HYKKA2RU49 373 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 NCR1O76036 304 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 SLC22A5O76082 557 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 DDCP20711 480 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 HOXD9P28356 352 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 SSTR2P30874 369 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 SOX9P48436 509 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ATAT1Q5SQI0 421 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 FAM9CQ8IZT9 166 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 FAM46DQ8NEK8 389 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 OR4A15Q8NGL6 344 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 OR52P1PQ8NH57 321 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 CMTM7Q96FZ5 175 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 MAGEB10Q96LZ2 347 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 DPCDQ9BVM2 203 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 RACGAP1Q9H0H5 632 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ASIC5Q9NY37 505 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 B3GNT2Q9NY97 397 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 PCDHB1Q9Y5F3 818 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 IQCMA0A1B0GVH7 501 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ATP6V1G2-DDX39BF2Z307 99 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 GBAP04062 536 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 GSTM1P09488 218 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 MSL3P1P0C860 447 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 GAB1Q13480 694 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 CPTPQ5TA50 214 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ZBTB37Q5TC79 503 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 CASP12Q6UXS9 341 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 WDR53Q7Z5U6 358 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 VPS37AQ8NEZ2 397 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 FATE1Q969F0 183 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 EID2BQ96D98 161 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 HYLS1Q96M11 299 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 WDFY2Q96P53 400 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 GTPBP2Q9BX10 602 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 B3GNT4Q9C0J1 378 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 CDCP1Q9H5V8 836 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 PDFQ9HBH1 243 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 CNOT2Q9NZN8 540 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 FLRT1Q9NZU1 646 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 IGLV3-10A0A075B6K4 115 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 TRAV6A0A075B6T7 132 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 GNG14A0A1W2PPG7 69 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 PRAMEF25A6NGN4 478 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 FADS2P1A8MWK0 482 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 M0QZ92 97 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 GCM2O75603 506 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 EPORP19235 508 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 AVPR1BP47901 424 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ACSM2AQ08AH3 577 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 TAF10Q12962 218 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ARMC12Q5T9G4 340 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 OR2G6Q5TZ20 316 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 ACSM2BQ68CK6 577 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 BTN2A2Q8WVV5 523 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 DNAJA4Q8WW22 397 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 KCTD7Q96MP8 289 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 DCLRE1CQ96SD1 692 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 MND1Q9BWT6 205 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 TSSK6Q9BXA6 273 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 C1QTNF7Q9BXJ2 289 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 CCSER2Q9H7U1 834 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 NMNAT1Q9HAN9 279 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 TVP23BQ9NYZ1 205 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 KCNE2Q9Y6J6 123 aa11.07□□□□□ -0.64
HMGCS1-202ENST00000433297 PRAMEF33A0A0G2JMD5 474 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 A0A1B0GVC2 190 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 SH3D21A4FU49 640 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 A6NIN4 97 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 H3BUI4 141 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 CA12O43570 354 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 PRAMEF10O60809 474 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 HIST1H2AGP0C0S8 130 aaPredicted RBP11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 ZNF30P17039 623 aa11.06□□□□□ -0.64
HMGCS1-202ENST00000433297 HIST1H2ADP20671 130 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms