RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CCDC63Q8NA47 563 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CLEC1AQ8NC01 280 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TTLQ8NG68 377 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR7G3Q8NG95 312 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR11G2Q8NGC1 345 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR52B6Q8NGF0 335 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TRPC4APQ8TEL6 797 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 AENQ8WTP8 325 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF473Q8WTR7 871 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 MZB1Q8WU39 189 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 UBTD2Q8WUN7 234 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 UBE2E3Q969T4 207 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 WDR34Q96EX3 536 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 SMIM10Q96HG1 83 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 PTCHD1Q96NR3 888 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 IP6K3Q96PC2 410 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 NUDT9Q9BW91 350 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 SORBS1Q9BX66 1292 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TGIF2Q9GZN2 237 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 VN1R1Q9GZP7 353 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 REXO4Q9GZR2 422 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ADNPQ9H2P0 1102 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 MRPL46Q9H2W6 279 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR51B5Q9H339 312 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 CENPHQ9H3R5 247 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 EHD1Q9H4M9 534 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 COPS7BQ9H9Q2 264 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZBTB20Q9HC78 741 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZBTB26Q9HCK0 441 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 PRDM7Q9NQW5 492 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 LUZP4Q9P127 313 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 FETUBQ9UGM5 382 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 GDF2Q9UK05 429 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 FBXL4Q9UKA2 621 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 NXT1Q9UKK6 140 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 FBXW2Q9UKT8 454 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLAAQ9Y263 795 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TNPO3Q9Y5L0 923 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 HEMK1Q9Y5R4 338 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 HS3ST3B1Q9Y662 390 aa5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 TPRP12270 2363 aaKnown RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 KMT2BQ9UMN6 2715 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P24-201ENST00000433260 MED13Q9UHV7 2174 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 USP24Q9UPU5 2620 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 A0A1B0GTL3 188 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ARHGAP10A1A4S6 786 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 MAGEB17A8MXT2 336 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 G3V2L1 256 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 STX16-NPEPL1H3BU86 382 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PSMD12O00232 456 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 STX16O14662 325 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 B3GALT2O43825 422 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC28A2O43868 658 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SPAG7O75391 227 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SEC24DO94855 1032 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR4F21O95013 312 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 F10P00742 488 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 GBAP04062 536 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 UQCRHP07919 91 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 FHP07954 510 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 GSTA1P08263 222 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 C8orf89P0DMQ9 161 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 COX6A1P12074 109 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CREB1P16220 341 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 IMPDH1P20839 514 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 MAOAP21397 527 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CERS1P27544 350 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CASP2P42575 452 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PGDP52209 483 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 RAP1GDS1P52306 607 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 LIM2P55344 173 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR4D2P58180 307 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 PLAURQ03405 335 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CLCQ05315 142 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SRSF11Q05519 484 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 Q0VFX4 171 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 AIMP2Q13155 320 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SLC13A2Q13183 592 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 NSDHLQ15738 373 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 AP5B1Q2VPB7 878 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 LACTB2Q53H82 288 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SFT2D3Q587I9 215 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF678Q5SXM1 525 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 DEPDC1Q5TB30 811 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ZNF468Q5VIY5 522 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 IRAK1BP1Q5VVH5 260 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 KHDRBS2Q5VWX1 349 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 OR4C11Q6IEV9 310 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 TCTN3Q6NUS6 607 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ABHD17CQ6PCB6 329 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 EMBQ6PCB8 327 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SH2D5Q6ZV89 423 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CHSY3Q70JA7 882 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 NDUFAF7Q7L592 441 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CPEB2Q7Z5Q1 589 aaKnown RBP5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 UBE3DQ7Z6J8 389 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 ANKRD37Q7Z713 158 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 CLNKQ7Z7G1 428 aa5.43□□□□□ -1.54
HMGB3P24-201ENST00000433260 SYT9Q86SS6 491 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms