RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 TMEM168Q9H0V1 697 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SOX17Q9H6I2 414 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 RPF2Q9H7B2 306 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 EIF2B3Q9NR50 452 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CTPS2Q9NRF8 586 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 OR6C2Q9NZP2 312 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 DKK4Q9UBT3 224 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NDRG3Q9UGV2 375 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 EMC9Q9Y3B6 208 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 A0A1W2PPW3 197 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 STMND1H3BQB6 276 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TBX1O43435 398 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NARSO43776 548 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 FAM20BO75063 409 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CSTAP01040 98 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 RPSAP08865 295 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NDUFV2P19404 249 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 UQCRC1P31930 480 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ARFIP1P53367 373 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TMEM35AQ53FP2 167 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 PEAR1Q5VY43 1037 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 OR52E8Q6IFG1 317 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 UNC5DQ6UXZ4 953 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 LIPIQ6XZB0 460 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 IQCHQ86VS3 1027 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ANKRD46Q86W74 232 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 BCL7CQ8WUZ0 217 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 PIH1D2Q8WWB5 315 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 CCDC74AQ96AQ1 378 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SLC6A17Q9H1V8 727 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TMEM184CQ9NVA4 438 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 NOCTQ9UK39 431 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 KCTD3Q9Y597 815 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 ABCA4P78363 2273 aa6.94□□□□□ -1.3
CNOT4-206ENST00000428680 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
CNOT4-206ENST00000428680 TCF20Q9UGU0 1960 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PATJQ8NI35 1801 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 IQCMA0A1B0GVH7 501 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 A0A1W2PRG6 482 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 RTCAO00442 366 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 AREL1O15033 823 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 SMAD6O43541 496 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 NR0B1P51843 470 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 LASP1Q14847 261 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 IL20RBQ6UXL0 311 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PNPLA1Q8N8W4 532 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 KBTBD7Q8WVZ9 684 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ALG3Q92685 438 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 FATE1Q969F0 183 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 MARK4Q96L34 752 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 COL21A1Q96P44 957 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 CD180Q99467 661 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 CHID1Q9BWS9 393 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TDRD1Q9BXT4 1180 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TFB2MQ9H5Q4 396 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 WASH6PQ9NQA3 447 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TAGLN3Q9UI15 199 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TMPRSS11EQ9UL52 423 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 RPH3AQ9Y2J0 694 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 LOC102723532A0A0G2JNH3 316 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 FIGNL2A6NMB9 653 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 MAGEB17A8MXT2 336 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 SOX30O94993 753 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 OR5F1O95221 314 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 UBTFL6P0CB48 400 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 CREB1P16220 341 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 GABRA3P34903 492 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 HMGCLP35914 325 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PTPRCAPQ14761 206 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PAFAH1B3Q15102 231 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 SGCAQ16586 387 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 FLYWCH1Q4VC44 716 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ZCWPW2Q504Y3 356 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 C10orf62Q5T681 223 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF585AQ6P3V2 769 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 GFRALQ6UXV0 394 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ABHD12BQ7Z5M8 362 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TSPAN33Q86UF1 283 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TICAM1Q8IUC6 712 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 ZNF786Q8N393 782 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 FTMTQ8N4E7 242 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 POU5F2Q8N7G0 328 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TET1Q8NFU7 2136 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 OR2T12Q8NG77 320 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 OR4C15Q8NGM1 316 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 OR1N1Q8NGS0 311 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 TWIST2Q8WVJ9 160 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PTCD3Q96EY7 689 aaKnown RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 SLC2A13Q96QE2 648 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 IFT27Q9BW83 186 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 DUSP15Q9H1R2 295 aaPredicted RBP6.93□□□□□ -1.3
CNOT4-206ENST00000428680 SMOC1Q9H4F8 434 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 PLGRKTQ9HBL7 147 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 CUTCQ9NTM9 273 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 CLN6Q9NWW5 311 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 WDFY3Q8IZQ1 3526 aa6.93□□□□□ -1.3
CNOT4-206ENST00000428680 MYOCOSA0A1B0GUC4 107 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms