RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 RPP38P78345 283 aaKnown RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 DSG2Q14126 1118 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SPIN3Q5JUX0 258 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SLC7A5P1Q8MH63 180 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 MS4A4AQ96JQ5 239 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 HIST1H2AAQ96QV6 131 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 TEX13DA0A0J9YY54 714 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 CNMDO75829 334 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 CYBAP13498 195 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 PDX1P52945 283 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 ST3GAL3Q11203 375 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 GINS1Q14691 196 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 CLCA4Q14CN2 919 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SEC23BQ15437 767 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 TICAM1Q8IUC6 712 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 FAM217AQ8IXS0 508 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SCRN2Q96FV2 425 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SLC29A3Q9BZD2 475 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 BTBD1Q9H0C5 482 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 TMEM185BQ9H7F4 350 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 MOCS1Q9NZB8 636 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 A8MUA0 341 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SSX5O60225 188 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 ANXA3P12429 323 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF14P17017 642 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 PON3Q15166 354 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 C6orf136Q5SQH8 315 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF648Q5T619 568 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 TXNDC8Q6A555 127 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 MTFR2Q6P444 385 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SLC39A4Q6P5W5 647 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF367Q7RTV3 350 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 TMPRSS9Q7Z410 1059 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 RGMAQ96B86 450 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 MAELQ96JY0 434 aaKnown RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 HS3ST4Q9Y661 456 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SPEF2Q9C093 1822 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 FUOMA2VDF0 154 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 CAPN5O15484 640 aaPredicted RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 NDUFS4O43181 175 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 PCDHGA12O60330 932 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 IQCF3P0C7M6 154 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 CAP1Q01518 475 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 HYAL2Q12891 473 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 GPR33Q49SQ1 333 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 HSPA12BQ96MM6 686 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 CD180Q99467 661 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 RAD9AQ99638 391 aa13.98□□□□□ -0.17
PTPRU-204ENST00000428026 MRPL15Q9P015 296 aaKnown RBP13.98□□□□□ -0.17
PTPRU-204ENST00000428026 GLI3P10071 1580 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF670-ZNF695F2Z2N8 137 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 PIGRP01833 764 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 F8A1P23610 371 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 GDI1P31150 447 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 HOXD13P35453 343 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 PIK3CBP42338 1070 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 CD47Q08722 323 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 RHEBQ15382 184 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 C2orf27AQ580R0 203 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 SHQ1Q6PI26 577 aaKnown RBP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 OR52E4Q8NGH9 312 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 FAM120CQ9NX05 1096 aaKnown RBP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 PRSS51A0A1B0GVH4 220 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 FLRT2O43155 660 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 DENRO43583 198 aaKnown RBP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 ACP5P13686 325 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 BMP8BP34820 402 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 HLCSP50747 726 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 ILF3Q12906 894 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 NFATC3Q12968 1075 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 BMP8AQ7Z5Y6 402 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 HMGN2P46Q86SG4 172 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 C2CD4AQ8NCU7 369 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 CDKN1CP49918 316 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 PLEKHG7Q6ZR37 379 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 TMEM145Q8NBT3 493 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 SLC45A3Q96JT2 553 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 OR2S2Q9NQN1 319 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 NR4A2P43354 598 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 STC1P52823 247 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 MORN1Q5T089 497 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 CDCA2Q69YH5 1023 aaPredicted RBP13.97□□□□□ -0.17
PTPRU-204ENST00000428026 GTF2IRD2BQ6EKJ0 949 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 GTF2IRD2Q86UP8 949 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 LHFPL3Q86UP9 236 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 HDDC3Q8N4P3 179 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 FAIMQ9NVQ4 179 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 ABCD2Q9UBJ2 740 aa13.97□□□□□ -0.17
PTPRU-204ENST00000428026 LCHNA4D1U4 455 aa13.96□□□□□ -0.17
PTPRU-204ENST00000428026 BLOC1S5-TXNDC5H3BN57 136 aa13.96□□□□□ -0.17
PTPRU-204ENST00000428026 MT-ND5P03915 603 aa13.96□□□□□ -0.17
PTPRU-204ENST00000428026 CXCR1P25024 350 aa13.96□□□□□ -0.17
PTPRU-204ENST00000428026 TM4SF4P48230 202 aa13.96□□□□□ -0.17
PTPRU-204ENST00000428026 MAPK14Q16539 360 aa13.96□□□□□ -0.17
PTPRU-204ENST00000428026 ZNF630Q2M218 657 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-204ENST00000428026 GRASPQ7Z6J2 395 aaPredicted RBP13.96□□□□□ -0.17
PTPRU-204ENST00000428026 SAMD14Q8IZD0 417 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms