RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TRIM4Q9C037 500 aa25.31■■□□□ 1.64
SH3GL3-202ENST00000427482 ABCG4Q9H172 646 aa25.31■■□□□ 1.64
SH3GL3-202ENST00000427482 PRDM7Q9NQW5 492 aa25.31■■□□□ 1.64
SH3GL3-202ENST00000427482 AK5Q9Y6K8 562 aa25.31■■□□□ 1.64
SH3GL3-202ENST00000427482 SAC3D1A6NKF1 404 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 SERPINA1P01009 418 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 LDLRP01130 860 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 IL1RNP18510 177 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 ALDH9A1P49189 494 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 NKG7Q16617 165 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 INTS11Q5TA45 600 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 IQCHQ86VS3 1027 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 EPHX4Q8IUS5 362 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 NR1H4Q96RI1 486 aaPredicted RBP25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 DPH2Q9BQC3 489 aaPredicted RBP25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 ANKMY1Q9P2S6 941 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 ENTPD2Q9Y5L3 495 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 PRKD3O94806 890 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 NTRK1P04629 796 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 MAGP20916 626 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 TP53BP1Q12888 1972 aaPredicted RBP25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 MED21Q13503 144 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 NRF1Q16656 503 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 PPP4R4Q6NUP7 873 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 ZBTB49Q6ZSB9 765 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 VN1R4Q7Z5H5 301 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 SRFBP1Q8NEF9 429 aaKnown RBP25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 ZDHHC1Q8WTX9 485 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 SLC47A1Q96FL8 570 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 ZNF597Q96LX8 424 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 YY1AP1Q9H869 796 aa25.3■■□□□ 1.64
SH3GL3-202ENST00000427482 STK25O00506 426 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 PDPK1O15530 556 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 FAM58BPP0C7Q3 252 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 HIST1H1TP22492 207 aaPredicted RBP25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 RPS9P46781 194 aaKnown RBP25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 MVDP53602 400 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 STXBP1P61764 594 aaKnown RBP25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 RACK1P63244 317 aaKnown RBP25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 RPL6Q02878 288 aaKnown RBP25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 TRIM40Q6P9F5 258 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 UBALD2Q8IYN6 164 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 EID3Q8N140 333 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 FAM46DQ8NEK8 389 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 MAGIXQ9H6Y5 334 aa25.29■■□□□ 1.64
SH3GL3-202ENST00000427482 C19orf67A6NJJ6 358 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 C2orf74A8MZ97 194 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 SOCS2O14508 198 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 TXNDC9O14530 226 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 AXIN1O15169 862 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 DENRO43583 198 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 CSF2P04141 144 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 NME1P15531 152 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 MAOBP27338 520 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 FRKP42685 505 aaPredicted RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 TSFMP43897 325 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 VEZF1Q14119 521 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 FCRL6Q6DN72 434 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 PACRGLQ8N7B6 248 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 OR52N2Q8NGI0 321 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 NT5CQ8TCD5 201 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 C9orf16Q9BUW7 83 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 SLAMF7Q9NQ25 335 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 GPATCH2Q9NW75 528 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 KLK4Q9Y5K2 254 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 AP4B1Q9Y6B7 739 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 GON4LQ3T8J9 2241 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 CLOCKO15516 846 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 FKBP9O95302 570 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 NUDT7P0C024 238 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 DRD2P14416 443 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 ATP5A1P25705 553 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 SLC9A5Q14940 896 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 C16orf72Q14CZ0 275 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 SLC5A12Q1EHB4 618 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 MRM1Q6IN84 353 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 FBXO42Q6P3S6 717 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 FIGLAQ6QHK4 219 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 SPESP1Q6UW49 350 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 TMEM26Q6ZUK4 368 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 ASPGQ86U10 573 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 RBM12BQ8IXT5 1001 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 ZCCHC7Q8N3Z6 543 aaKnown RBP25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 ACOT4Q8N9L9 421 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 OR8K5Q8NH50 307 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 OR5P2Q8WZ92 322 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 FCRL4Q96PJ5 515 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 Q9H521 79 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 OAZ3Q9UMX2 235 aa25.28■■□□□ 1.64
SH3GL3-202ENST00000427482 C7orf72A4D263 438 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 PCBP4P57723 403 aaKnown RBP25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 HHEXQ03014 270 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 TMTC4Q5T4D3 741 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 FAM180BQ6P0A1 224 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 SPRED1Q7Z699 444 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 GATA6Q92908 595 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 SPACA7Q96KW9 195 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 BDH2Q9BUT1 245 aa25.27■■□□□ 1.64
SH3GL3-202ENST00000427482 TAS2R7Q9NYW3 318 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms