RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PDLIM2Q96JY6 352 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SERPINB12Q96P63 405 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SMC6Q96SB8 1091 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NDNQ99608 321 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ROGDIQ9GZN7 287 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ADAP2Q9NPF8 381 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NECTIN3Q9NQS3 549 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SACM1LQ9NTJ5 587 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RYDENQ9NUL5 291 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 B4GALT7Q9UBV7 327 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 COPS7AQ9UBW8 275 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 VWA7Q9Y334 891 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 LRBAP50851 2863 aa11.43□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SUSD5O60279 629 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 COX7A2P14406 83 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KIR2DL3P43628 341 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 IST1P53990 364 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 BIKQ13323 160 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SERTAD2Q14140 314 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PPP1R7Q15435 360 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ELAVL1Q15717 326 aaKnown RBP11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HIST2H2ACQ16777 129 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SPANXN3Q5MJ09 141 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HIST2H2AA3Q6FI13 130 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TRIM40Q6P9F5 258 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ARSKQ6UWY0 536 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CAMKMTQ7Z624 323 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TMPRSS11BQ86T26 416 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CA13Q8N1Q1 262 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM109AQ8N4B1 249 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MORN4Q8NDC4 146 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR2M7Q8NG81 312 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NEIL2Q969S2 332 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 NCLNQ969V3 563 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GAL3ST3Q96A11 431 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RMND5BQ96G75 393 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 VPS39Q96JC1 886 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PITHD1Q9GZP4 211 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 IL1RL2Q9HB29 575 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 LZTFL1Q9NQ48 299 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PLSCR2Q9NRY7 297 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MYOTQ9UBF9 498 aa11.42□□□□□ -0.58
HLA-DQB3-203ENST00000425319 IGKV3D-11A0A0A0MRZ8 115 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HSPB2A8KAH6 182 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FAM166BA8MTA8 275 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CLGNO14967 610 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR2J2O76002 312 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 C1GALT1C1LP0DN25 315 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FOSL1P15407 271 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 IGFBP2P18065 325 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SLC12A2P55011 1212 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RAB38P57729 211 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCZ1BP86790 482 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCZ1P86791 482 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HSPB2Q16082 182 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CCDC137Q6PK04 289 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TMIGD1Q6UXZ0 262 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MBOAT1Q6ZNC8 495 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MDGA2Q7Z553 956 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FGD2Q7Z6J4 655 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ZNF227Q86WZ6 799 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TGIF2LYQ8IUE0 185 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CHERPQ8IWX8 916 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 LIX1Q8N485 282 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GOLM1Q8NBJ4 401 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 APCDD1LQ8NCL9 501 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR5M9Q8NGP3 310 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR14A16Q8NHC5 309 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ANKRD7Q92527 254 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PDLIM5Q96HC4 596 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 PBKQ96KB5 322 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SIGLEC10Q96LC7 697 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TSNARE1Q96NA8 513 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SERINC2Q96SA4 455 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TTYH2Q9BSA4 534 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 FOXD3Q9UJU5 478 aaPredicted RBP11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SLC22A14Q9Y267 594 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 MED16Q9Y2X0 877 aa11.41□□□□□ -0.58
HLA-DQB3-203ENST00000425319 AQP7O14520 342 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DVL2O14641 736 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 ERI3O43414 337 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 HCN1O60741 890 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CTNSO60931 367 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SNRNP200O75643 2136 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 AHSGP02765 367 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SMIM10L1P0DMW3 83 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 DRD2P14416 443 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KLK2P20151 261 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CDC25BP30305 580 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 CXCR5P32302 372 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 RPL21P46778 160 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 SNRPNP63162 240 aaKnown RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 REEP5Q00765 189 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 WDR53Q7Z5U6 358 aaPredicted RBP11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 GALNT7Q86SF2 657 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 TMEM139Q8IV31 216 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 KLHDC8AQ8IYD2 350 aa11.4□□□□□ -0.58
HLA-DQB3-203ENST00000425319 OR8K3Q8NH51 312 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms