RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 MED27Q6P2C8 311 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 TRIM40Q6P9F5 258 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 GOLGA7Q7Z5G4 137 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 CRLF3Q8IUI8 442 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 GSPT2Q8IYD1 628 aaKnown RBP16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 TMEM151AQ8N4L1 468 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 NFAM1Q8NET5 270 aaPredicted RBP16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 ELP5Q8TE02 316 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 SERINC2Q96SA4 455 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 CSF3RQ99062 836 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 RNF32Q9H0A6 362 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 KCMF1Q9P0J7 381 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 XPR1Q9UBH6 696 aa16.72■□□□□ 0.27
SBDSP1-202ENST00000423945 A8MUI8 341 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 PSMD12O00232 456 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 RTCAO00442 366 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 CYR61O00622 381 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 KRT38O76015 456 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 CBX6O95503 412 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 TGFB1P01137 390 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 PCNAP12004 261 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 CNTFP26441 200 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 MTTPP55157 894 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 LIM2P55344 173 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 AP2B1P63010 937 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 ACTN3Q08043 901 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 GTF2H2Q13888 395 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 NR6A1Q15406 480 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 ACER2Q5QJU3 275 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 RPUSD3Q6P087 351 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 GTF2H2CQ6P1K8 395 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 KLC3Q6P597 504 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 TRMT10CQ7L0Y3 403 aaKnown RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 PTGR2Q8N8N7 351 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 FAM47BQ8NA70 645 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 OR1N1Q8NGS0 311 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 MAGEB10Q96LZ2 347 aaPredicted RBP16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 L2HGDHQ9H9P8 463 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 KCNK13Q9HB14 408 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 STMN3Q9NZ72 180 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 DAPP1Q9UN19 280 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 MMACHCQ9Y4U1 282 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 IKBKGQ9Y6K9 419 aa16.71■□□□□ 0.27
SBDSP1-202ENST00000423945 SVILO95425 2214 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 EXOC1LA0A1B0GW35 172 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 DYTNA2CJ06 578 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 SAGE2PA6NJ88 616 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 A8MUA0 341 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 B3GALT2O43825 422 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 RBP1P09455 135 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 COL6A2P12110 1019 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 PPP2R1BP30154 601 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF33BQ06732 778 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 EIF2S3LQ2VIR3 472 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 ABHD17BQ5VST6 288 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 LIPJQ5W064 366 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 ADGRD1Q6QNK2 874 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 TAOK1Q7L7X3 1001 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 CYP4X1Q8N118 509 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 BEST3Q8N1M1 668 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 FAM26EQ8N5C1 309 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 HUS1BQ8NHY5 278 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 GRHL3Q8TE85 626 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 UBE2E3Q969T4 207 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 PHF21BQ96EK2 531 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 NSUN5Q96P11 429 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 TAAR6Q96RI8 345 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 MAPKAP1Q9BPZ7 522 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 SORBS1Q9BX66 1292 aaKnown RBP16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 SLC29A3Q9BZD2 475 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 OR51B5Q9H339 312 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 ZBTB26Q9HCK0 441 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 TSC22D4Q9Y3Q8 395 aa16.7■□□□□ 0.26
SBDSP1-202ENST00000423945 ZGRF1Q86YA3 2104 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 USP9YO00507 2555 aaPredicted RBP16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 OR5H15A6NDH6 313 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 SAP18O00422 153 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 OR7A17O14581 309 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 SCELO95171 688 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 UQCRHP07919 91 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 SNRPAP09012 282 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 ATP5A1P25705 553 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 EEF1DP29692 281 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 HSD17B7P56937 341 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 SLC29A2Q14542 456 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 TSNAXIP1Q2TAA8 658 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 DEPDC1Q5TB30 811 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 TIFABQ6ZNK6 161 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 ACOT4Q8N9L9 421 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 L3MBTL4Q8NA19 623 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 OR52B6Q8NGF0 335 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 ZNF354BQ96LW1 612 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 KCNC2Q96PR1 638 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 TBCDQ9BTW9 1192 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 IPPKQ9H8X2 491 aa16.69■□□□□ 0.26
SBDSP1-202ENST00000423945 DMRT3Q9NQL9 472 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms