RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 RCN2Q14257 317 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 CMC1Q7Z7K0 106 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 TBC1D1Q86TI0 1168 aaPredicted RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 KIF2BQ8N4N8 673 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 OR2L5Q8NG80 312 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 STAG3L4Q8TBR4 150 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 WDR34Q96EX3 536 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 PTCD3Q96EY7 689 aaKnown RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 LRRC1Q9BTT6 524 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 EFCAB11Q9BUY7 163 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 NMRAL1Q9HBL8 299 aa23.7■■□□□ 1.38
VEGFA-208ENST00000417285 PTBP2Q9UKA9 531 aaKnown RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 MRPS33Q9Y291 106 aaKnown RBP23.7■■□□□ 1.38
VEGFA-208ENST00000417285 MYO7BQ6PIF6 2116 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 FCHO1O14526 889 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 TPP2P29144 1249 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-208ENST00000417285 HNRNPH1P31943 449 aaKnown RBP23.69■■□□□ 1.38
VEGFA-208ENST00000417285 TGM3Q08188 693 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 ART3Q13508 389 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 RUNX2Q13950 521 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 PDK4Q16654 411 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 HIST2H2ACQ16777 129 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-208ENST00000417285 WHAMMP3Q1A5X7 153 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 ADPRMQ3LIE5 342 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 FBXO48Q5FWF7 155 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 PAGE2BQ5JRK9 111 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 SP5Q6BEB4 398 aaPredicted RBP23.69■■□□□ 1.38
VEGFA-208ENST00000417285 HIST2H2AA3Q6FI13 130 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 EXT2Q93063 718 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 GPR137Q96N19 417 aa23.69■■□□□ 1.38
VEGFA-208ENST00000417285 REXO4Q9GZR2 422 aaKnown RBP23.69■■□□□ 1.38
VEGFA-208ENST00000417285 C4orf51C9J302 202 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 SLC19A2O60779 497 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 SLC35E2BP0CK96 405 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 TFEBP19484 476 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 HLCSP50747 726 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 CLCN2P51788 898 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 EFTUD2Q15029 972 aaKnown RBP eCLIP23.68■■□□□ 1.384e-10■■■■■ 38.6
VEGFA-208ENST00000417285 MAPKAPK3Q16644 382 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 XKR6Q5GH73 641 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 TRIM40Q6P9F5 258 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 RPTNQ6XPR3 784 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 CEP128Q6ZU80 1094 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 GALNTL5Q7Z4T8 443 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 SCUBE1Q8IWY4 988 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 ZNF595Q8IYB9 648 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 B3GNT7Q8NFL0 401 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 ESAMQ96AP7 390 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 TMEM125Q96AQ2 219 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 QRFPRQ96P65 431 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 SERINC2Q96SA4 455 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 HES7Q9BYE0 225 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 ALG9Q9H6U8 611 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 ZDHHC18Q9NUE0 388 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 NUDT4Q9NZJ9 180 aa23.68■■□□□ 1.38
VEGFA-208ENST00000417285 ZNF490Q9ULM2 529 aaPredicted RBP23.68■■□□□ 1.38
VEGFA-208ENST00000417285 PPIEQ9UNP9 301 aaKnown RBP23.68■■□□□ 1.38
VEGFA-208ENST00000417285 A8MUA0 341 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 HNRNPRO43390 633 aaKnown RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 CCNT2O60583 730 aaKnown RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 SLC25A12O75746 678 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 LTA4HP09960 611 aaKnown RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 PHBP35232 272 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 PLA2G16P53816 162 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 RAB38P57729 211 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 SRSF11Q05519 484 aaKnown RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 DOC2AQ14183 400 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 TBCCQ15814 346 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 LRRC70Q7Z2Q7 622 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 CCDC91Q7Z6B0 441 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 SRFBP1Q8NEF9 429 aaKnown RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 CD244Q9BZW8 370 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 ROGDIQ9GZN7 287 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 RUBCNLQ9H714 662 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 PRTFDC1Q9NRG1 225 aa23.67■■□□□ 1.38
VEGFA-208ENST00000417285 KLF2Q9Y5W3 355 aaPredicted RBP23.67■■□□□ 1.38
VEGFA-208ENST00000417285 NME2P1O60361 137 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 MYO1DO94832 1006 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 NME2P22392 152 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 CASP2P42575 452 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ST13P50502 369 aaKnown RBP23.66■■□□□ 1.38
VEGFA-208ENST00000417285 MTTPP55157 894 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 SLC13A2Q13183 592 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ZNF468Q5VIY5 522 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ABHD17CQ6PCB6 329 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ISCA2Q86U28 154 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ZNF808Q8N4W9 903 aaPredicted RBP23.66■■□□□ 1.38
VEGFA-208ENST00000417285 APCDD1LQ8NCL9 501 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 UBE2E3Q969T4 207 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 MAGED4Q96JG8 741 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 FRMD6Q96NE9 622 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 PNO1Q9NRX1 252 aaKnown RBP23.66■■□□□ 1.38
VEGFA-208ENST00000417285 MTRF1LQ9UGC7 380 aaKnown RBP23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ZNF835Q9Y2P0 537 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 ACOT9Q9Y305 439 aa23.66■■□□□ 1.38
VEGFA-208ENST00000417285 A0A087X1B8 175 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 A0A0G2JN53 185 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 SUPT3HB4E1H0 165 aa23.65■■□□□ 1.38
VEGFA-208ENST00000417285 NPIPA5E9PKD4 350 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms