RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 ARRB1P49407 418 aaPredicted RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 NOVA1P51513 510 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 EIF3EP60228 445 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PFN3P60673 137 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 RPL26P61254 145 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 POLR2LP62875 67 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 MRPS15P82914 257 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 IL9RQ01113 521 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 OTUD4Q01804 1114 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 RELQ04864 619 aaPredicted RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CDK18Q07002 472 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SLC14A1Q13336 389 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PDE1CQ14123 709 aaPredicted RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 FZD2Q14332 565 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ACOX1Q15067 660 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 RPS6KA1Q15418 735 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SHBQ15464 509 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 MOGQ16653 247 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PARP6Q2NL67 630 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 WSCD2Q2TBF2 565 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CDONQ4KMG0 1287 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 WASHC2DQ5SRD0 308 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 TPRG1LQ5T0D9 272 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ARMC4Q5T2S8 1044 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SEL1L2Q5TEA6 688 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 LRRC66Q68CR7 880 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 FAM122CQ6P4D5 195 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CRTC1Q6UUV9 634 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 UNC5DQ6UXZ4 953 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ZNF600Q6ZNG1 722 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 Q6ZSR6 202 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PIP4P1Q86T03 277 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PATL1Q86TB9 770 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 TSPAN33Q86UF1 283 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SPATA24Q86W54 205 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CDKL3Q8IVW4 592 aaPredicted RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 NAXDQ8IW45 347 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 IFT20Q8IY31 132 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ZNF567Q8N184 647 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SLC22A18ASQ8N1D0 253 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PELI3Q8N2H9 469 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CCDC197Q8NCU1 140 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 DEFB124Q8NES8 71 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 OR56A3Q8NH54 315 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SPATA22Q8NHS9 363 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 AENQ8WTP8 325 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 RASSF5Q8WWW0 418 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 HTR3CQ8WXA8 447 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ABTB1Q969K4 478 aaPredicted RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 EME1Q96AY2 570 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 TADA1Q96BN2 335 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 TBC1D20Q96BZ9 403 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 NUS1Q96E22 293 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SCRN2Q96FV2 425 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 IMP4Q96G21 291 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 EGLN2Q96KS0 407 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 BMFQ96LC9 184 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 TRIB3Q96RU7 358 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SECISBP2Q96T21 854 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CIB1Q99828 191 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 CTRCQ99895 268 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PTDSS2Q9BVG9 487 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 AMBRA1Q9C0C7 1298 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ERVMER34-1Q9H9K5 563 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SCPEP1Q9HB40 452 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PCDH9Q9HC56 1237 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 C8orf4Q9NR00 106 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 MBNL1Q9NR56 388 aaKnown RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SACM1LQ9NTJ5 587 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 ABCF3Q9NUQ8 709 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 GIN1Q9NXP7 522 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 SLC39A1Q9NY26 324 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 KLHL8Q9P2G9 620 aaPredicted RBP4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 FAM153AQ9UHL3 310 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PHTF1Q9UMS5 762 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 BTBD3Q9Y2F9 522 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PPIL1Q9Y3C6 166 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 PCDHGB2Q9Y5G2 931 aa4.71□□□□□ -1.66
ATG4AP1-201ENST00000416893 COL5A1P20908 1838 aaPredicted RBP4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 C1orf232A0A0U1RR37 186 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 SPTY2D1-AS1A0A0U1RR47 76 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 LRRC3CA6NJW4 275 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 SNTNA6NMZ2 147 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 VWC2LB2RUY7 222 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 TMEM233B4DJY2 109 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 PYCARD-AS1I3L0S3 204 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 GOLGA8RI6L899 631 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 PSMD11O00231 422 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 KCNN4O15554 427 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 FLRT2O43155 660 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 SDC3O75056 442 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 CNOT3O75175 753 aaKnown RBP4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 PMPCBO75439 489 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 ATP5HO75947 161 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 KCNK5O95279 499 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 NDST3O95803 873 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 CRYZL1O95825 349 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 PIRTP0C851 137 aa4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 UBTFL6P0CB48 400 aaPredicted RBP4.7□□□□□ -1.66
ATG4AP1-201ENST00000416893 NR2F6P10588 404 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms