RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 LAPTM5Q13571 262 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 PDK4Q16654 411 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 SLC25A25Q6KCM7 469 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 RAPH1Q70E73 1250 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 UBE3DQ7Z6J8 389 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 ZNF227Q86WZ6 799 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 TMEM52Q8NDY8 209 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 ARMC2Q8NEN0 867 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 NXNL1Q96CM4 212 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 F2RL3Q96RI0 385 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 EFCAB11Q9BUY7 163 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 KLHL1Q9NR64 748 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 KCMF1Q9P0J7 381 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 SEC14L3Q9UDX4 400 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 PPIEQ9UNP9 301 aaKnown RBP16.72■□□□□ 0.27
CPNE1-210ENST00000416778 ACOT9Q9Y305 439 aa16.72■□□□□ 0.27
CPNE1-210ENST00000416778 TGFBR3LH3BV60 316 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 B3GALT2O43825 422 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 CCNT2O60583 730 aaKnown RBP16.71■□□□□ 0.27
CPNE1-210ENST00000416778 UNC5CO95185 931 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 SP1P08047 785 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 LTA4HP09960 611 aaKnown RBP16.71■□□□□ 0.27
CPNE1-210ENST00000416778 MTHFD2P13995 350 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 CD46P15529 392 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 TPP2P29144 1249 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-210ENST00000416778 HNRNPFP52597 415 aaKnown RBP16.71■□□□□ 0.27
CPNE1-210ENST00000416778 HSD17B7P56937 341 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 RAB38P57729 211 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 IRF8Q02556 426 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 EFTUD2Q15029 972 aaKnown RBP eCLIP16.71■□□□□ 0.274e-8■■■■■ 37.6
CPNE1-210ENST00000416778 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
CPNE1-210ENST00000416778 HIST2H2ACQ16777 129 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-210ENST00000416778 HIST2H2AA3Q6FI13 130 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 APCDD1LQ8NCL9 501 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 SERINC2Q96SA4 455 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 PRTFDC1Q9NRG1 225 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 LRFN1Q9P244 771 aa16.71■□□□□ 0.27
CPNE1-210ENST00000416778 ASPDHA6ND91 283 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 CLDN4O14493 209 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 CTNSO60931 367 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 KERAO60938 352 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 S100BP04271 92 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-210ENST00000416778 C2P06681 752 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 HPDP32754 393 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-210ENST00000416778 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-210ENST00000416778 MTTPP55157 894 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 LIM2P55344 173 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 PER3P56645 1201 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 OC90Q02509 493 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-210ENST00000416778 PAGE2BQ5JRK9 111 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 MROH9Q5TGP6 573 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 C1QL3Q5VWW1 255 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 TRIM40Q6P9F5 258 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 LRRC70Q7Z2Q7 622 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 TBC1D1Q86TI0 1168 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-210ENST00000416778 FJX1Q86VR8 437 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 ZNF595Q8IYB9 648 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 HORMAD2Q8N7B1 307 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 B3GNT7Q8NFL0 401 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 ZNF473Q8WTR7 871 aaKnown RBP16.7■□□□□ 0.26
CPNE1-210ENST00000416778 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 NUDT4Q9NZJ9 180 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 DAPP1Q9UN19 280 aa16.7■□□□□ 0.26
CPNE1-210ENST00000416778 A0A088AWK7 358 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 K7EPI3 171 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 UBXN8O00124 270 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 ZG16O60844 167 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 ZNF10P21506 573 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 EEF1DP29692 281 aaKnown RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 PPP2R1BP30154 601 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 DCTP40126 519 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 HLCSP50747 726 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 CKAP4Q07065 602 aaKnown RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 SLMAPQ14BN4 828 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 TERF2Q15554 542 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 KRTCAP3Q53RY4 240 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 ZNF787Q6DD87 383 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 GALNTL5Q7Z4T8 443 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 RELL1Q8IUW5 271 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 LAS2Q8IYD9 372 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 CENPLQ8N0S6 344 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 RHEBL1Q8TAI7 183 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 KCTD4Q8WVF5 259 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 EXT2Q93063 718 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 MRRFQ96E11 262 aaKnown RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 GPR78Q96P69 363 aa16.69■□□□□ 0.26
CPNE1-210ENST00000416778 PNO1Q9NRX1 252 aaKnown RBP16.69■□□□□ 0.26
CPNE1-210ENST00000416778 A0A087X1B8 175 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 URI1O94763 535 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-210ENST00000416778 MYO1DO94832 1006 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 CERS1P27544 350 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 MSH2P43246 934 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 CYB561P49447 251 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 CLCN2P51788 898 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 IRF9Q00978 393 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 SLC13A2Q13183 592 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 MAPKAPK3Q16644 382 aa16.68■□□□□ 0.26
CPNE1-210ENST00000416778 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms