RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 STAG3L4Q8TBR4 150 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 THAP3Q8WTV1 239 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 GPR137Q96N19 417 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 SERINC2Q96SA4 455 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 TRIM45Q9H8W5 580 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF490Q9ULM2 529 aaPredicted RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 RNF112Q9ULX5 631 aa16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 MRPS33Q9Y291 106 aaKnown RBP16.45■□□□□ 0.22
PDLIM2-208ENST00000416159 CCNT2O60583 730 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 PRAMEF4O60810 478 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 SLC25A12O75746 678 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 STX2P32856 288 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 TRHRP34981 398 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 CLCN2P51788 898 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 PLA2G16P53816 162 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 MTTPP55157 894 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 IRF8Q02556 426 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 RCN2Q14257 317 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 TBCCQ15814 346 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 MAPKAPK3Q16644 382 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 FBXO48Q5FWF7 155 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF468Q5VIY5 522 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 PRAMEF9Q5VWM5 478 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 ABHD17CQ6PCB6 329 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 RAPH1Q70E73 1250 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 VN1R5Q7Z5H4 357 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 CCDC25Q86WR0 208 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF595Q8IYB9 648 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 ARMC10Q8N2F6 343 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 SRFBP1Q8NEF9 429 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 FBXO25Q8TCJ0 367 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 CD244Q9BZW8 370 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 NMRAL1Q9HBL8 299 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 PNO1Q9NRX1 252 aaKnown RBP16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 ENTPD4Q9Y227 616 aa16.44■□□□□ 0.22
PDLIM2-208ENST00000416159 GTF3C1Q12789 2109 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 MYO1DO94832 1006 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 TBX6O95947 436 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 CRABP2P29373 138 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 CASP2P42575 452 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 KCNC1P48547 511 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 HLCSP50747 726 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 SLC13A2Q13183 592 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 CHIT1Q13231 466 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 NAB1Q13506 487 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 SP5Q6BEB4 398 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 SYT10Q6XYQ8 523 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 TBC1D1Q86TI0 1168 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 ISCA2Q86U28 154 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 APCDD1LQ8NCL9 501 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 FBF1Q8TES7 1133 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 TMEM125Q96AQ2 219 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 VMP1Q96GC9 406 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 FRMD6Q96NE9 622 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 ROGDIQ9GZN7 287 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 COPS7BQ9H9Q2 264 aaPredicted RBP16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 NUDT4Q9NZJ9 180 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 DAPP1Q9UN19 280 aa16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 PPIEQ9UNP9 301 aaKnown RBP16.43■□□□□ 0.22
PDLIM2-208ENST00000416159 TRBV11-1A0A0K0K1C0 115 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 PRSS44E7EML9 344 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 NPIPA5E9PKD4 350 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 NME2P1O60361 137 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 SLC19A2O60779 497 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 FAM155BO75949 473 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 WISP2O76076 250 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 LTA4HP09960 611 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 TFEBP19484 476 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 CD22P20273 847 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 NME2P22392 152 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 LIM2P55344 173 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ART3Q13508 389 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 SLMAPQ14BN4 828 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 EFTUD2Q15029 972 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ZDHHC24Q6UX98 284 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 RPTNQ6XPR3 784 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF808Q8N4W9 903 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ITLN2Q8WWU7 325 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 EXT2Q93063 718 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 UBE2E3Q969T4 207 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 CCDC120Q96HB5 630 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 CCDC77Q9BR77 488 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ALG9Q9H6U8 611 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ADAP2Q9NPF8 381 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 PRDM7Q9NQW5 492 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 SH3BGRL2Q9UJC5 107 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 FBXW2Q9UKT8 454 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 NPIPA1Q9UND3 350 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 ZNF835Q9Y2P0 537 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 CLDN16Q9Y5I7 305 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 PCNX1Q96RV3 2341 aa16.42■□□□□ 0.22
PDLIM2-208ENST00000416159 CYR61O00622 381 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 HNRNPRO43390 633 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 ASNA1O43681 348 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 CTNSO60931 367 aa16.41■□□□□ 0.22
PDLIM2-208ENST00000416159 KERAO60938 352 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms