RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 PLA2G16P53816 162 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 HYAL2Q12891 473 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 SPDYAQ5MJ70 313 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 C1orf189Q5VU69 101 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 HIST2H2BCQ6DN03 193 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 TMEM214Q6NUQ4 689 aaKnown RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 TTLL10Q6ZVT0 673 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 CHSY3Q70JA7 882 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 DTWD1Q8N5C7 304 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 TM4SF19Q96DZ7 209 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 FAR2Q96K12 515 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 CATSPER2Q96P56 530 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 TEFMQ96QE5 360 aaKnown RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 SERPINI1Q99574 410 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 MRPL1Q9BYD6 325 aaKnown RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 AICDAQ9GZX7 198 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 TUBB1Q9H4B7 451 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 KLHL31Q9H511 634 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 NPHS2Q9NP85 383 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 DHCR7Q9UBM7 475 aaKnown RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 ANAPC2Q9UJX6 822 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 TP53TG5Q9Y2B4 290 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 MAN2B2Q9Y2E5 1009 aa12.91□□□□□ -0.34
CPNE1-209ENST00000415920 USP9XQ93008 2570 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-209ENST00000415920 USP9YO00507 2555 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 SEC16AO15027 2179 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 A0A0A6YYC8 382 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 FITM1A5D6W6 292 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 LRIT2A6NDA9 550 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 H3BMH7 237 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 I3L1I5 382 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 SLC28A1O00337 649 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 RTCAO00442 366 aaKnown RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 ATP6AP2O75787 350 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 MED26O95402 600 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 TBX6O95947 436 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 B3GALT4O96024 378 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 LSP1P33241 339 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 STAT5AP42229 794 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 HK2P52789 917 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 RPL38P63173 70 aaKnown RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 ZNF33BQ06732 778 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 TGM3Q08188 693 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 ABHD18Q0P651 414 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 SLC9A5Q14940 896 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 GALNTL6Q49A17 601 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 DEFB134Q4QY38 66 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 XKR7Q5GH72 579 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 BPHLQ86WA6 291 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 LRRC34Q8IZ02 419 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 GBP7Q8N8V2 638 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 OR2L5Q8NG80 312 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 OR2T11Q8NH01 316 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 UTP15Q8TED0 518 aaKnown RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 KIAA1143Q96AT1 154 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 TUBGCP3Q96CW5 907 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 MS4A6EQ96DS6 147 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 SORBS1Q9BX66 1292 aaKnown RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 FAM107BQ9H098 131 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 PFDN4Q9NQP4 134 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 RIC8BQ9NVN3 520 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 VPS29Q9UBQ0 182 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 GIMAP2Q9UG22 337 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 PCDHB3Q9Y5E6 796 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 USH1CQ9Y6N9 552 aa12.9□□□□□ -0.34
CPNE1-209ENST00000415920 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
CPNE1-209ENST00000415920 TNRC6AQ8NDV7 1962 aaKnown RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 A0A088AWK7 358 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 GOLGA8QA0A0J9YX86 632 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 A0A1B0GX78 115 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 GOLGA8OA6NCC3 632 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 TRPC5OSA6NMA1 111 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 GOLGA8NF8WBI6 632 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 SLCO1B7G3V0H7 640 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 PLPP1O14494 284 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 DSCR3O14972 297 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 HDAC3O15379 428 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 RDH16O75452 317 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 RSL1D1O76021 490 aaKnown RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 KLHL18O94889 574 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 SEMA3DO95025 777 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 NTRK1P04629 796 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 TROVE2P10155 538 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 GP1BBP13224 206 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ALOX12P18054 663 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 TCN2P20062 427 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ZNF10P21506 573 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ALAS2P22557 587 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 PTX3P26022 381 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-209ENST00000415920 CERS1P27544 350 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 AVPR1BP47901 424 aa12.89□□□□□ -0.35
CPNE1-209ENST00000415920 ARSFP54793 590 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms