RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 GOLGA7Q7Z5G4 137 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 IFT20Q8IY31 132 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 GSPT2Q8IYD1 628 aaKnown RBP9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 LRRN4CLQ8ND94 238 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 OR7G3Q8NG95 312 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 RHEBL1Q8TAI7 183 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF473Q8WTR7 871 aaKnown RBP9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 THAP3Q8WTV1 239 aaPredicted RBP9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 DCAKDQ8WVC6 231 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAR1Q8WVX9 515 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 WDR34Q96EX3 536 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 CDK15Q96Q40 435 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 TAAR6Q96RI8 345 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 CSF3RQ99062 836 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 HES7Q9BYE0 225 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 ACTR8Q9H981 624 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 PRDM7Q9NQW5 492 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 KLHL1Q9NR64 748 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 COPG2Q9UBF2 871 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 FBXW2Q9UKT8 454 aa9.54□□□□□ -0.88
NCKIPSD-202ENST00000413374 A0A087WUV0 522 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 A0A088AWK7 358 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 TCRBV16S1A1N1A0A5B0 115 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 A1L4Q6 167 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLEC18AA5D8T8 446 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 GABRR3A8MPY1 467 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 TGFBR3LH3BV60 316 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLDN4O14493 209 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 PRAMEF2O60811 474 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 KRT38O76015 456 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 WISP2O76076 250 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 RASAL1O95294 804 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 IFNA16P05015 189 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CYC1P08574 325 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF10P21506 573 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 GSTM2P28161 218 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 EEF1DP29692 281 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CASP2P42575 452 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 SERPINB9P50453 376 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 NEK2P51955 445 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ALDH18A1P54886 795 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ID2Q02363 134 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 TUBA3CQ13748 450 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 GTF2H2Q13888 395 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 TBCCQ15814 346 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CPSF6Q16630 551 aaKnown RBP eCLIP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ADPRMQ3LIE5 342 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 TECRLQ5HYJ1 363 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM219BQ5XKK7 198 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 GRHL2Q6ISB3 625 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 H3F3CQ6NXT2 135 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 GTF2H2CQ6P1K8 395 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 TUBA3EQ6PEY2 450 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 FAM180AQ6UWF9 173 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLEC18BQ6UXF7 455 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ZNF793Q6ZN11 406 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CHSY3Q70JA7 882 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 RPS27LQ71UM5 84 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 RPS19BP1Q86WX3 136 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 OR4N5Q8IXE1 308 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 LAS2Q8IYD9 372 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 PTGR2Q8N8N7 351 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ACOT4Q8N9L9 421 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLEC18CQ8NCF0 446 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 NFAM1Q8NET5 270 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 HUS1BQ8NHY5 278 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ELP5Q8TE02 316 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 DOK4Q8TEW6 326 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 UBTD2Q8WUN7 234 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 UBE2E3Q969T4 207 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ATP6V1E2Q96A05 226 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 SIGLEC12Q96PQ1 595 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 SERINC2Q96SA4 455 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 MTERF1Q99551 399 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 MAPKAP1Q9BPZ7 522 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 UTP23Q9BRU9 249 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 NPLQ9BXD5 320 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 MS4A8Q9BY19 250 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 FUT8Q9BYC5 575 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 PITHD1Q9GZP4 211 aaPredicted RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 NOL11Q9H8H0 719 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 IPPKQ9H8X2 491 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 LIN28AQ9H9Z2 209 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 CLK4Q9HAZ1 481 aaKnown RBP9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 OLAHQ9NV23 265 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 ABI3Q9P2A4 366 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 OSGIN2Q9Y236 505 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 RNF11Q9Y3C5 154 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 SCN3AQ9NY46 2000 aa9.53□□□□□ -0.88
NCKIPSD-202ENST00000413374 IGKV3D-11A0A0A0MRZ8 115 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 TRBV11-1A0A0K0K1C0 115 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 EXOC1LA0A1B0GW35 172 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 SAGE2PA6NJ88 616 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 WASHC1A8K0Z3 465 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 CYR61O00622 381 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 LDB3O75112 727 aa9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 SNRPAP09012 282 aaKnown RBP9.52□□□□□ -0.89
NCKIPSD-202ENST00000413374 RBP1P09455 135 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms