RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 RBM4BQ9BQ04 359 aaKnown RBP5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 FNDC11Q9BVV2 318 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 RBM4Q9BWF3 364 aaKnown RBP5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 API5Q9BZZ5 524 aaKnown RBP5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 MCOLN1Q9GZU1 580 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 ZNF275Q9NSD4 429 aaPredicted RBP5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 CYTH4Q9UIA0 394 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 NOCTQ9UK39 431 aaKnown RBP5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 FBXO4Q9UKT5 387 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 GRIP1Q9Y3R0 1128 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 A3GALT2U3KPV4 340 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 ERBINQ96RT1 1412 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 ARHGEF5Q12774 1597 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 TIAM1Q13009 1591 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 EFCAB6Q5THR3 1501 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 DUOX2Q9NRD8 1548 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 TET3O43151 1660 aa5.53□□□□□ -1.52
CBX1P3-201ENST00000413296 PRAMEF33A0A0G2JMD5 474 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 A0A0U1RQF3 1178 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ESYT2A0FGR8 921 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 UBE2QL1A1L167 161 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 MS4A18H0YCH9 400 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 PRAMEF10O60809 474 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 GSRP00390 522 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 FTH1P02794 183 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 RFPL3SP0C7P2 107 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CCL2P13500 99 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CEACAM1P13688 526 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CAPN2P17655 700 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 NT5EP21589 574 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 MAT2AP31153 395 aaKnown RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CRATP43155 626 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 MAGEA9P43362 315 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 SLC9A3P48764 834 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 NLRP11P59045 1033 aaKnown RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 VBP1P61758 197 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 TNNC1P63316 161 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 FPGSQ05932 587 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 LRRC63Q05C16 580 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 STIM1Q13586 685 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 DMC1Q14565 340 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ELAVL3Q14576 367 aaKnown RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 MAPRE2Q15555 327 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 SNCBQ16143 134 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 C2orf68Q2NKX9 166 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 TMEM44Q2T9K0 475 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 AGKQ53H12 422 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CEP78Q5JTW2 689 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 C20orf194Q5TEA3 1177 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 VWA5B1Q5TIE3 1220 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ALS2CLQ60I27 953 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 WSCD1Q658N2 575 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 PLEKHA7Q6IQ23 1121 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 UGT3A1Q6NUS8 523 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 TMEM220Q6QAJ8 160 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CDHR3Q6ZTQ4 885 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 IL17RELQ6ZVW7 336 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 LINGO2Q7L985 606 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 SPRED1Q7Z699 444 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 LHFPL4Q7Z7J7 247 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 DTX2Q86UW9 622 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ADGRG3Q86Y34 549 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 FAM114A1Q8IWE2 563 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 NELFCDQ8IXH7 590 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 GPR65Q8IYL9 337 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 LRRC34Q8IZ02 419 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 BEST2Q8NFU1 509 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 OR1J2Q8NGS2 313 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 XAGE5Q8WWM1 108 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 PHYHIPQ92561 330 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ATOH1Q92858 354 aaPredicted RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 WBP2Q969T9 261 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 RFT1Q96AA3 541 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 FOXN4Q96NZ1 517 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CASD1Q96PB1 797 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CCT8L2Q96SF2 557 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CBWD1Q9BRT8 395 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 CENPKQ9BS16 269 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 FRMD8Q9BZ67 464 aaPredicted RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ROGDIQ9GZN7 287 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 DPAGT1Q9H3H5 408 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ZDHHC6Q9H6R6 413 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ACTR5Q9H9F9 607 aaPredicted RBP5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 ELOVL3Q9HB03 270 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 TXNRD2Q9NNW7 524 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 SLC39A1Q9NY26 324 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 EURLQ9NYK6 297 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 MTCH1Q9NZJ7 389 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 TXNDC16Q9P2K2 825 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 DDX19BQ9UMR2 479 aa5.52□□□□□ -1.53
CBX1P3-201ENST00000413296 LRRIQ1Q96JM4 1722 aa5.51□□□□□ -1.53
CBX1P3-201ENST00000413296 CNTNAP5Q8WYK1 1306 aa5.51□□□□□ -1.53
CBX1P3-201ENST00000413296 NOS1P29475 1434 aa5.51□□□□□ -1.53
CBX1P3-201ENST00000413296 SETD5Q9C0A6 1442 aa5.51□□□□□ -1.53
CBX1P3-201ENST00000413296 RIMS2Q9UQ26 1411 aa5.51□□□□□ -1.53
CBX1P3-201ENST00000413296 GOLGA8QA0A0J9YX86 632 aa5.51□□□□□ -1.53
CBX1P3-201ENST00000413296 MEX3AA1L020 520 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms