RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GAS2L3Q86XJ1 694 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SCUBE1Q8IWY4 988 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PPIL6Q8IXY8 311 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CLYBLQ8N0X4 340 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GPATCH11Q8N954 259 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR2M7Q8NG81 312 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR5M9Q8NGP3 310 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CREB3L4Q8TEY5 395 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MS4A14Q96JA4 679 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 AICDAQ9GZX7 198 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PRTFDC1Q9NRG1 225 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PNPLA3Q9NST1 481 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HPF1Q9NWY4 346 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PPIEQ9UNP9 301 aaKnown RBP13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SLC22A14Q9Y267 594 aa13.25□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A0A0G2JN53 185 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TGFBR3LH3BV60 316 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ACOT7O00154 380 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CLDN4O14493 209 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 KLK8O60259 260 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 BANF1O75531 89 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZWINTO95229 277 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ACVR2AP27037 513 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 IST1P53990 364 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HSD17B7P56937 341 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SLC13A2Q13183 592 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 XKR6Q5GH73 641 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SPANXN3Q5MJ09 141 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZNF662Q6ZS27 426 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CNTN4Q8IWV2 1026 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GPALPP1Q8IXQ4 340 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ASB15Q8WXK1 588 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SLC24A3Q9HC58 644 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PPANQ9NQ55 473 aaKnown RBP13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SLC17A6Q9P2U8 582 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 IKZF3Q9UKT9 509 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 VWA7Q9Y334 891 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CLDN16Q9Y5I7 305 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 KCNE2Q9Y6J6 123 aa13.24□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMEM200CA6NKL6 621 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 G3V3Y1 287 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 WWP2O00308 870 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 H2AFYO75367 372 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR6B1O95007 311 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TTC4O95801 387 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SOX3P41225 446 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HNRNPFP52597 415 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RAB38P57729 211 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZNF750Q32MQ0 723 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SBSNQ6UWP8 590 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RGS9BPQ6ZS82 235 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SLC22A16Q86VW1 577 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RASGEF1CQ8N431 466 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMEM52Q8NDY8 209 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCT6BQ92526 530 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GAL3ST3Q96A11 431 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CERS2Q96G23 380 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PDLIM5Q96HC4 596 aaKnown RBP13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TTYH2Q9BSA4 534 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NPLQ9BXD5 320 aaPredicted RBP13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TTTY12Q9BZ98 90 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZDHHC11Q9H8X9 412 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ADAP2Q9NPF8 381 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MYOTQ9UBF9 498 aa13.23□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ITPR3Q14573 2671 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A0A0G2JMM0 328 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MYOCOSA0A1B0GUC4 107 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A0A1W2PPB8 328 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 A0A1W2PRS3 328 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 OR14I1A6ND48 311 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 KIR3DP1A8MWS1 328 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 BCKDKO14874 412 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NRDCO43847 1150 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 IFNA16P05015 189 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CNR1P21554 472 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 HNRNPH1P31943 449 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 ZFP36L2P47974 494 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCZ1BP86790 482 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CYP1B1Q16678 543 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 PPP1R3AQ16821 1122 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 MSS51Q4VC12 460 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 NDUFAF5Q5TEU4 345 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAM45BPQ6NSW5 357 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 B3GNT6Q6ZMB0 384 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 GALNT7Q86SF2 657 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 IGDCC3Q8IVU1 814 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 TMEM132CQ8N3T6 1108 aa13.22□□□□□ -0.29
HLA-DQB2-229ENST00000411527 FAM47BQ8NA70 645 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms