RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 HIST2H2AA3Q6FI13 130 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 PAGE2Q7Z2X7 111 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 ZNF605Q86T29 641 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 MMP21Q8N119 569 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 KIAA1958Q8N8K9 716 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 OR9Q2Q8NGE9 314 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 TRIM43Q96BQ3 446 aaPredicted RBP15.19■□□□□ 0.02
HOXD3-202ENST00000410016 MTERF3Q96E29 417 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 ZHX1-C8orf76Q96EF9 292 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 LINC00615Q96LM1 132 aaPredicted RBP15.19■□□□□ 0.02
HOXD3-202ENST00000410016 SLC6A16Q9GZN6 736 aa15.19■□□□□ 0.02
HOXD3-202ENST00000410016 TRNAU1APQ9NX07 287 aaKnown RBP15.19■□□□□ 0.02
HOXD3-202ENST00000410016 PCDH17O14917 1159 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TIMP1P01033 207 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 ITGA2P17301 1181 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TGM1P22735 817 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 RPL3P39023 403 aaKnown RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 IDH2P48735 452 aaKnown RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 DGKGP49619 791 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 ZNF630Q2M218 657 aaPredicted RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 C12orf40Q86WS4 652 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 DENND6BQ8NEG7 585 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 MYDGFQ969H8 173 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 DACH2Q96NX9 599 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 RAD9AQ99638 391 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 ZBTB20Q9HC78 741 aaPredicted RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 PRDM8Q9NQV8 689 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 GPR83Q9NYM4 423 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 SLC6A14Q9UN76 642 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TSC22D4Q9Y3Q8 395 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 CHD7Q9P2D1 2997 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 A0A1W2PRB8 838 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 ADAM23O75077 832 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TBX6O95947 436 aaPredicted RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 ARAFP10398 606 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 UGT2B10P36537 528 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 LIMK1P53667 647 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TEKQ02763 1124 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TIGD6Q17RP2 521 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 UNC5DQ6UXZ4 953 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 GEMIN6Q8WXD5 167 aaKnown RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 PIP5K1AQ99755 562 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 SORBS1Q9BX66 1292 aaKnown RBP15.18■□□□□ 0.02
HOXD3-202ENST00000410016 ZDHHC5Q9C0B5 715 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 CRISPLD2Q9H0B8 497 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 DCSTAMPQ9H295 470 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 DSN1Q9H410 356 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 TAAR2Q9P1P5 351 aa15.18■□□□□ 0.02
HOXD3-202ENST00000410016 C17orf113A0A1B0GUU1 675 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 AIREO43918 545 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 POP7O75817 140 aaKnown RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 IL3P08700 152 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 CHI3L1P36222 383 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 NUDT6P53370 316 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 TUBA1BP68363 451 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 HTRA4P83105 476 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 NFE2L1Q14494 772 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 DUSP7Q16829 419 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 PLPP4Q5VZY2 271 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 TUBA1AQ71U36 451 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 TRMT11Q7Z4G4 463 aaKnown RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 FAM129CQ86XR2 697 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 ARMC8Q8IUR7 673 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 PLD3Q8IV08 490 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 PSD2Q9BQI7 771 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 DPEP2Q9H4A9 486 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 CCDC177Q9NQR7 707 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 ICKQ9UPZ9 632 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 HCN4Q9Y3Q4 1203 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 PCYT1BQ9Y5K3 369 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 CYP17A1P05093 508 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 STSP08842 583 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 GADD45AP24522 165 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 TPP2P29144 1249 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 GRK5P34947 590 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 FAM180BQ6P0A1 224 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 TMIGD1Q6UXZ0 262 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 SLC46A3Q7Z3Q1 461 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 C11orf96Q7Z7L8 435 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 ZBTB8BQ8NAP8 495 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 SETD7Q8WTS6 366 aaKnown RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 ARRDC3Q96B67 414 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 RSPO3Q9BXY4 272 aaPredicted RBP15.17■□□□□ 0.02
HOXD3-202ENST00000410016 GIN1Q9NXP7 522 aa15.17■□□□□ 0.02
HOXD3-202ENST00000410016 PI15O43692 258 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 POU2F1P14859 743 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 CBLP22681 906 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 CTSKP43235 329 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 GPR1P46091 355 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 CLK1P49759 484 aaKnown RBP15.16■□□□□ 0.02
HOXD3-202ENST00000410016 VEGFBP49765 207 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 IRF3Q14653 427 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 PUM1Q14671 1186 aaKnown RBP eCLIP15.16■□□□□ 0.02
HOXD3-202ENST00000410016 TCEAL5Q5H9L2 206 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 RAET1GQ6H3X3 334 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 FAM83HQ6ZRV2 1179 aaPredicted RBP15.16■□□□□ 0.02
HOXD3-202ENST00000410016 IKBIPQ70UQ0 350 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 ZNF765Q7L2R6 523 aa15.16■□□□□ 0.02
HOXD3-202ENST00000410016 DEPDC4Q8N2C3 294 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms