RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 FTSJ1Q9UET6 329 aa15.97■□□□□ 0.15
LIMS2-208ENST00000410011 LOC110117498-PIK3R3F6TDL0 507 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 KLHL18O94889 574 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 GADD45GO95257 159 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 LRG1P02750 347 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 NUDT6P53370 316 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 KCNJ8Q15842 424 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 SLC5A12Q1EHB4 618 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 ZNF648Q5T619 568 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 ZNF770Q6IQ21 691 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 OTOP2Q7RTS6 562 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 PIK3R3Q92569 461 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 CENPOQ9BU64 300 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 RC3H2Q9HBD1 1191 aaKnown RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 FZD3Q9NPG1 666 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 NDOR1Q9UHB4 597 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 DYRK1BQ9Y463 629 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 DSPPQ9NZW4 1301 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 HTTP42858 3142 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 PRAMEF33A0A0G2JMD5 474 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 A0A1W2PRU2 124 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 CACNB4O00305 520 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 PCDH17O14917 1159 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 TGM5O43548 720 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 PRAMEF10O60809 474 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 LEFTY1O75610 366 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 GSSP48637 474 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 CRISP1P54107 249 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 TBPL1P62380 186 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 C2orf80Q0P641 193 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 PLAG1Q6DJT9 500 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 DEFB128Q7Z7B8 93 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 CCDC190Q86UF4 302 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 ATCAYQ86WG3 371 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 LILRA3Q8N6C8 439 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 OR9Q2Q8NGE9 314 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 SAMD11Q96NU1 681 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 FAM129BQ96TA1 746 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 YME1L1Q96TA2 773 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 MGLLQ99685 303 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 CTRCQ99895 268 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 WRAP53Q9BUR4 548 aaKnown RBP15.96■□□□□ 0.15
LIMS2-208ENST00000410011 TAPBPLQ9BX59 468 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 CLN6Q9NWW5 311 aa15.96■□□□□ 0.15
LIMS2-208ENST00000410011 H3BM21 787 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 CCRL2O00421 344 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 ZW10O43264 779 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 KCNK2O95069 426 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 TPTEP56180 551 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 SNRPGP62308 76 aaKnown RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 RHAGQ02094 409 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 SLBPQ14493 270 aaKnown RBP eCLIP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 BCL7AQ4VC05 210 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 CNKSR3Q6P9H4 555 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 TMEM220Q6QAJ8 160 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 GDPGP1Q6ZNW5 385 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 RNF130Q86XS8 419 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 NATD1Q8N6N6 113 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 FOXJ1Q92949 421 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 UBE2E3Q969T4 207 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PDXPQ96GD0 296 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PPP1R16AQ96I34 528 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 TRNT1Q96Q11 434 aaKnown RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 CCDC32Q9BV29 185 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 ITM2CQ9NQX7 267 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 QPCTLQ9NXS2 382 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 GULP1Q9UBP9 304 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 TRAPPC4Q9Y296 219 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 WBP11Q9Y2W2 641 aaKnown RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PCDHGB6Q9Y5F9 930 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PCM1Q15154 2024 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 BRCA2P51587 3418 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 LOC100506127A0A0U1RQW1 187 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 A0A1W2PRB8 838 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PIPSLA2A3N6 862 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PSMD11O00231 422 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 SNPHO15079 494 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PQBP1O60828 265 aaKnown RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 SH3BGRLO75368 114 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 UQCRC2P22695 453 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 PDHA2P29803 388 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 CHI3L1P36222 383 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 DEFA1P59665 94 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 DEFA3P59666 94 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 ZNF805Q5CZA5 627 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 DEPDC1Q5TB30 811 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 RNLSQ5VYX0 342 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 LILRA6Q6PI73 481 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 KLHL17Q6TDP4 642 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 CCDC149Q6ZUS6 474 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 AKAP14Q86UN6 197 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 LRRC56Q8IYG6 542 aaPredicted RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 FAM46DQ8NEK8 389 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 SETD7Q8WTS6 366 aaKnown RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 APOBEC4Q8WW27 367 aaKnown RBP15.95■□□□□ 0.14
LIMS2-208ENST00000410011 IRF7Q92985 503 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 C3orf14Q9HBI5 128 aa15.95■□□□□ 0.14
LIMS2-208ENST00000410011 SLC25A19Q9HC21 320 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms