RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TRAM2Q15035 370 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 SLC2A7Q6PXP3 512 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 AHSA2Q719I0 299 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 BMP8AQ7Z5Y6 402 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 LRRC25Q8N386 305 aaPredicted RBP16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 DEFB119Q8N690 84 aa16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCDHA13-202ENST00000409494 BLACEA4D250 179 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 A8MUA0 341 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 SMAD6O43541 496 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 C6orf47O95873 294 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 ZNF3P17036 446 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 ACVR2AP27037 513 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RBMS1P29558 406 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 CDH15P55291 814 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RAB15P59190 212 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RAPSNQ13702 412 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 IQCCQ4KMZ1 466 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RAB6CQ53S08 254 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 PNCKQ6P2M8 343 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 PARS2Q7L3T8 475 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 CEP97Q8IW35 865 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 DEFB126Q9BYW3 111 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RAB6CQ9H0N0 254 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 TM9SF3Q9HD45 589 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 LDB2O43679 373 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RTN4RL1Q86UN2 441 aaPredicted RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 FUBP1Q96AE4 644 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 ZFYVE21Q9BQ24 234 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 IL21RQ9HBE5 538 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 TREX1Q9NSU2 369 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 MGAT4BQ9UQ53 548 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 IGLV3-10A0A075B6K4 115 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 SNPHO15079 494 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 PDYNP01213 254 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 BCKDHAP12694 445 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 C1orf61Q13536 156 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 CMPK2Q5EBM0 449 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 HOXD1Q9GZZ0 328 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 KIAA0100Q14667 2235 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 GRXCR2A6NFK2 248 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 CASKO14936 926 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 SNNO75324 88 aaPredicted RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 PRKD3O94806 890 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 ZNF41P51814 821 aaPredicted RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 TUBA4AP68366 448 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 MLLT1Q03111 559 aaPredicted RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 MVKQ03426 396 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 RASGEF1BQ0VAM2 473 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 SLAMF1Q13291 335 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 DUSP6Q16828 381 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 ATG14Q6ZNE5 492 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 OR2L2Q8NH16 312 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 HPS1Q92902 700 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 GTPBP3Q969Y2 492 aaKnown RBP16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 MCCC2Q9HCC0 563 aa16.13■□□□□ 0.17
PCDHA13-202ENST00000409494 CCDC182A6NF36 153 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 HOXC11O43248 304 aaPredicted RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 CER1O95813 267 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 MNDAP41218 407 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 MRPL58Q14197 206 aaKnown RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 LASP1Q14847 261 aaKnown RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 RPL13AP3Q6NVV1 102 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 METTL25Q8N6Q8 603 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 SLC22A8Q8TCC7 542 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 TGM7Q96PF1 710 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 HIST1H2AAQ96QV6 131 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 STOX2Q9P2F5 926 aaPredicted RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 B4GALT7Q9UBV7 327 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PPM1BO75688 479 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 DHRS4L1P0CG22 281 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 T-ENOLP0DO92 83 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 HLA-FP30511 346 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 OR4C11Q6IEV9 310 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 GALNT12Q8IXK2 581 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 RNASE11Q8TAA1 199 aaKnown RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 ELSPBP1Q96BH3 223 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 TPSD1Q9BZJ3 242 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 LHX3Q9UBR4 397 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PTBP2Q9UKA9 531 aaKnown RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PCTPQ9UKL6 214 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PLCL2Q9UPR0 1127 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 UBE2QL1A1L167 161 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 SAGE2PA6NJ88 616 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PDCD5O14737 125 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PORP16435 677 aaPredicted RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 AHCYP23526 432 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PPP3R1P63098 170 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 RBM48Q5RL73 367 aaKnown RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 TSACCQ96A04 125 aaPredicted RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 TRIM2Q9C040 744 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 OR8D2Q9GZM6 311 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 DOCK2Q92608 1830 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 IDH3BO43837 385 aa16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 PLGP00747 810 aaPredicted RBP16.12■□□□□ 0.17
PCDHA13-202ENST00000409494 DMPKQ09013 629 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms