RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 AENQ8WTP8 325 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 NTMT1Q9BV86 223 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 TRIM4Q9C037 500 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 ZBTB26Q9HCK0 441 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 TSC22D4Q9Y3Q8 395 aa16.87■□□□□ 0.29
PDLIM2-206ENST00000409141 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 SAP18O00422 153 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CDH16O75309 829 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 UQCRHP07919 91 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CELA2AP08217 269 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RPS17P08708 135 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 MAOAP21397 527 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 LIM2P55344 173 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RAB38P57729 211 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RASA2Q15283 850 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 EMBQ6PCB8 327 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ISLR2Q6UXK2 745 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 QSOX2Q6ZRP7 698 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RIPOR1Q6ZS17 1223 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 MILR1Q7Z6M3 343 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 AMER2Q8N7J2 671 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ARMC2Q8NEN0 867 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 OR2W6PQ8NHA6 318 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 BRIX1Q8TDN6 353 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PPP4R1Q8TF05 950 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ZNF483Q8TF39 744 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RGMAQ96B86 450 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CENPKQ9BS16 269 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 DMRT3Q9NQL9 472 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PRDM9Q9NQV7 894 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 DOCK10Q96BY6 2186 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 TTLL8A6PVC2 850 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PYCARD-AS1I3L0S3 204 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RTCAO00442 366 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CLDN4O14493 209 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 DLX3O60479 287 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ATP5F1P24539 256 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ATP5A1P25705 553 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PTX3P26022 381 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CCT5P48643 541 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CD97P48960 835 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 NEK2P51955 445 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RAP1GDS1P52306 607 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 CDH13P55290 713 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RPS13P62277 151 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 HERVK_113P63132 956 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 RCN2Q14257 317 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 BTBD16Q32M84 506 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 TTC19Q6DKK2 380 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 LINC00696Q6ZRV3 163 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 SIRT6Q8N6T7 355 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ACOT4Q8N9L9 421 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 FAM47BQ8NA70 645 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ADAMTS18Q8TE60 1221 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PSMF1Q92530 271 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 MTFMTQ96DP5 389 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 LPAR4Q99677 370 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 WDR77Q9BQA1 342 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 C1QTNF3Q9BXJ4 246 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 ERVK-6Q9BXR3 956 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PARD6BQ9BYG5 372 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 EPS8L2Q9H6S3 715 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 PTGFRNQ9P2B2 879 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 DAPP1Q9UN19 280 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 MRPS33Q9Y291 106 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 SCN2AQ99250 2005 aa16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 GCN1Q92616 2671 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-206ENST00000409141 GLRA3O75311 464 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 SUPT7LO94864 414 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 OTCP00480 354 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 ITGAMP11215 1152 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 TSPAN8P19075 237 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 IMPDH1P20839 514 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 HIST1H1TP22492 207 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 SSR2P43308 183 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 MLLT10P55197 1068 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 IFFO1Q0D2I5 559 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 TRAF3Q13114 568 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 CRB2Q5IJ48 1285 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 SLC6A19Q695T7 634 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 PLAG1Q6DJT9 500 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 OR4C11Q6IEV9 310 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 PAPD4Q6PIY7 484 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 ZNF793Q6ZN11 406 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 SH2D5Q6ZV89 423 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 SLC22A9Q8IVM8 553 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 OR4F6Q8NGB9 312 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 WDR20Q8TBZ3 569 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 TRPC4APQ8TEL6 797 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 PNPLA2Q96AD5 504 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 MAGEB10Q96LZ2 347 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 LMF1Q96S06 567 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 SLAMF7Q9NQ25 335 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 NECTIN3Q9NQS3 549 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 PRTFDC1Q9NRG1 225 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 LUZP4Q9P127 313 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 GRID1Q9ULK0 1009 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 MMACHCQ9Y4U1 282 aa16.85■□□□□ 0.29
PDLIM2-206ENST00000409141 BSNQ9UPA5 3926 aa16.84■□□□□ 0.29
PDLIM2-206ENST00000409141 IGKV3D-11A0A0A0MRZ8 115 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms