RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 PDP2Q9P2J9 529 aa18.05■□□□□ 0.48
USP39-202ENST00000409025 FAM170BA6NMN3 283 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 OR5K4A6NMS3 321 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 GNGT2O14610 69 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 ERI3O43414 337 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 NUDT7P0C024 238 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 CTSEP14091 401 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 UQCRC2P22695 453 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 PCGF2P35227 344 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 RPS15AP62244 130 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 TXNL4AP83876 142 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 FADDQ13158 208 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 C16orf72Q14CZ0 275 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 TJAP1Q5JTD0 557 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 TMEM214Q6NUQ4 689 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 TRIM40Q6P9F5 258 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 TAF8Q7Z7C8 310 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 CHERPQ8IWX8 916 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 AMER3Q8N944 861 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 C11orf65Q8NCR3 313 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 OR2L5Q8NG80 312 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 KCNC2Q96PR1 638 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 MACROD1Q9BQ69 325 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 TEX10Q9NXF1 929 aaPredicted RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 RAPGEFL1Q9UHV5 662 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 FBXL21Q9UKT6 434 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 KIR2DS5A0A0G2JLQ3 304 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 A0A0G2JNG1 304 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 KRBA1A5PL33 1030 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 A6NHS1 94 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 KIR2DS3K7RE56 304 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 UPK1AO00322 258 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 PPM1DO15297 605 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 NDUFS2O75306 463 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 FAM58BPP0C7Q3 252 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 DRD2P14416 443 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 RPS9P46781 194 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 BLKP51451 505 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 MVDP53602 400 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 MANFP55145 182 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 STARD6P59095 220 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 STXBP1P61764 594 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 SLC9A5Q14940 896 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 KIR2DS5Q14953 304 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 TEAD4Q15561 434 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 ABHD17CQ6PCB6 329 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 ZNF793Q6ZN11 406 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 ADHFE1Q8IWW8 467 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 ZCCHC7Q8N3Z6 543 aaKnown RBP18.04■□□□□ 0.48
USP39-202ENST00000409025 OR2A14Q96R47 310 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 FAIM2Q9BWQ8 316 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 NLNQ9BYT8 704 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 ABCG4Q9H172 646 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 CAAP1Q9H8G2 361 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 CPNE7Q9UBL6 633 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 WNT16Q9UBV4 365 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 UTS2RQ9UKP6 389 aa18.04■□□□□ 0.48
USP39-202ENST00000409025 SNRNP200O75643 2136 aaKnown RBP18.03■□□□□ 0.48
USP39-202ENST00000409025 OR6C74A6NCV1 312 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 GUCY1B2O75343 617 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 UGT2B7P16662 529 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 COX20Q5RI15 118 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 GCNT6Q5T4J0 391 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 CBLL1Q75N03 491 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 EIF3MQ7L2H7 374 aaKnown RBP18.03■□□□□ 0.48
USP39-202ENST00000409025 ST13P4Q8IZP2 240 aaPredicted RBP18.03■□□□□ 0.48
USP39-202ENST00000409025 OR10G6Q8NH81 332 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 OR5AK3PQ8NH89 298 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 FLVCR1-AS1Q8TAF5 88 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 MAGEE2Q8TD90 523 aaPredicted RBP18.03■□□□□ 0.48
USP39-202ENST00000409025 PATE1Q8WXA2 126 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 TFAP2CQ92754 450 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 EXOSC8Q96B26 276 aaKnown RBP18.03■□□□□ 0.48
USP39-202ENST00000409025 SDCCAG3Q96C92 435 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 SLC6A18Q96N87 628 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 ORAI3Q9BRQ5 295 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 FOXQ1Q9C009 403 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 TRIM4Q9C037 500 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 TWSG1Q9GZX9 223 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 PRDM7Q9NQW5 492 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 GPATCH2Q9NW75 528 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 ACTR10Q9NZ32 417 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 ACSL6Q9UKU0 697 aa18.03■□□□□ 0.48
USP39-202ENST00000409025 GSAPA4D1B5 854 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 DLGAP1O14490 977 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 TNFRSF21O75509 655 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 ETFAP13804 333 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 FOSL2P15408 326 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 POLR2CP19387 275 aaPredicted RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 HIST1H1TP22492 207 aaPredicted RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 TSFMP43897 325 aaKnown RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 CLCN2P51788 898 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 TGM3Q08188 693 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 RBBP4Q09028 425 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 SLAMF1Q13291 335 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 GK3PQ14409 553 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 PUS10Q3MIT2 529 aaKnown RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.02■□□□□ 0.48
USP39-202ENST00000409025 FAM180BQ6P0A1 224 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 PARGQ86W56 976 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms