RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 Q9N2J8 555 aa8.71□□□□□ -1.02
LIG4-202ENST00000405925 DMRT3Q9NQL9 472 aa8.71□□□□□ -1.02
LIG4-202ENST00000405925 SDR39U1Q9NRG7 319 aaPredicted RBP8.71□□□□□ -1.02
LIG4-202ENST00000405925 POT1Q9NUX5 634 aa8.71□□□□□ -1.02
LIG4-202ENST00000405925 SERGEFQ9UGK8 458 aa8.71□□□□□ -1.02
LIG4-202ENST00000405925 C1orf226A1L170 272 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GNB5O14775 395 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SLCO2B1O94956 709 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 CD160O95971 181 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 MYL12AP19105 171 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SLC7A1P30825 629 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 FOLH1Q04609 750 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 DPTQ07507 201 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 DGCR6Q14129 220 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 PDK3Q15120 406 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 NNATQ16517 81 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 BCL7AQ4VC05 210 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 TECPR1Q7Z6L1 1165 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GALNT10Q86SR1 603 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 PEX11GQ96HA9 241 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SLC38A2Q96QD8 506 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 THUMPD1Q9NXG2 353 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 GIN1Q9NXP7 522 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 USE1Q9NZ43 259 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 ACTR3BQ9P1U1 418 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RARRES3Q9UL19 164 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 ARID2Q68CP9 1835 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 A0A1B0GTW7 788 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 PRORSD1PA6NEY8 169 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 COQ9O75208 318 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 CREG1O75629 220 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 DIRAS1O95057 198 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SDC1P18827 310 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GANABQ14697 944 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
LIG4-202ENST00000405925 NDUFAF5Q5TEU4 345 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GALNT18Q6P9A2 607 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RANBP3LQ86VV4 465 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 SMRP1Q8NCR6 262 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 C16orf78Q8WTQ4 265 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 OR5P2Q8WZ92 322 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 EGLN2Q96KS0 407 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 JSRP1Q96MG2 331 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 C1QTNF2Q9BXJ5 285 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 TBL1XR1Q9BZK7 514 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 STRADBQ9C0K7 418 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GEMIN8Q9NWZ8 242 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 RIF1Q5UIP0 2472 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 A0A0G2JMZ2 1700 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 A0A0J9YY10 115 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 MGRN1O60291 552 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GABRG2P18507 467 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 CTSKP43235 329 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RPS9P46781 194 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 SERPINB10P48595 397 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 INHBCP55103 352 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RPS26P62854 115 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 GTDC1Q4AE62 458 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 TSSK4Q6SA08 328 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SLC29A4Q7RTT9 530 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SLC15A3Q8IY34 581 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 UBALD2Q8IYN6 164 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 LSMEM2Q8N112 164 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SYNPOQ8N3V7 929 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SPEM1Q8N4L4 309 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RORBQ92753 470 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 GTPBP3Q969Y2 492 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 C5orf34Q96MH7 638 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 DGCR6LQ9BY27 220 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RASSF1Q9NS23 344 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 WDR45Q9Y484 360 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 MAU2Q9Y6X3 613 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 A0A096LPI6 279 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 TRBC2A0A5B9 178 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 OTOL1A6NHN0 477 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 NME6O75414 186 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 GADD45GO95257 159 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 HLA-DQA2P01906 255 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 CHRM5P08912 532 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 POU2F2P09086 479 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 IMPDH2P12268 514 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 MTHFD2P13995 350 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 CERS1P27544 350 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 MAGEA12P43365 314 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 ADRM1Q16186 407 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 TRIM61Q5EBN2 209 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 OR52E8Q6IFG1 317 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 OGFOD2Q6N063 350 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 ABRAXAS1Q6UWZ7 409 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RABEPKQ7Z6M1 372 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 RBM12BQ8IXT5 1001 aaKnown RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 DEPDC4Q8N2C3 294 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 POMGNT2Q8NAT1 580 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 ZNF248Q8NDW4 579 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 SLC7A6OSQ96CW6 309 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 MYCBPQ99417 103 aaPredicted RBP8.7□□□□□ -1.02
LIG4-202ENST00000405925 STARD5Q9NSY2 213 aa8.7□□□□□ -1.02
LIG4-202ENST00000405925 TPRP12270 2363 aaKnown RBP8.69□□□□□ -1.02
LIG4-202ENST00000405925 A0A087WXM4 84 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms