RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 FPGTO14772 594 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 LRRTM2O43300 516 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 ERN1O75460 977 aaKnown RBP13.53□□□□□ -0.24
ATG3-202ENST00000402314 POP4O95707 220 aaKnown RBP13.53□□□□□ -0.24
ATG3-202ENST00000402314 CXCL14O95715 111 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 NRIP1P48552 1158 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 FADDQ13158 208 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 LY6G5CQ5SRR4 150 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 CPXM2Q8N436 756 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 KREMEN2Q8NCW0 462 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 HCAR2Q8TDS4 363 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 OMA1Q96E52 524 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 CCDC120Q96HB5 630 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 SNX18Q96RF0 628 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 CCNB1IP1Q9NPC3 277 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 PEX16Q9Y5Y5 336 aa13.53□□□□□ -0.24
ATG3-202ENST00000402314 IGLV3-16A0A075B6K0 115 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 CLIC1O00299 241 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 ARHGAP33O14559 1287 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 CCNYL3P0C7X3 344 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 COX7A2P14406 83 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 TYRP14679 529 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 SDHBP21912 280 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 UQCRC1P31930 480 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 SOX6P35712 828 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 ELP6Q0PNE2 266 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 DOC2AQ14183 400 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.24
ATG3-202ENST00000402314 ATG9BQ674R7 924 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 FAM180BQ6P0A1 224 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 GDPD4Q6W3E5 623 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 AADATQ8N5Z0 425 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 DTX3Q8N9I9 347 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 KBTBD8Q8NFY9 601 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 IL4I1Q96RQ9 567 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 NRTNQ99748 197 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 IL1RAPQ9NPH3 570 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 SLC25A13Q9UJS0 675 aa13.52□□□□□ -0.24
ATG3-202ENST00000402314 SZT2Q5T011 3432 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 RFXAPO00287 272 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 SAP18O00422 153 aaKnown RBP13.52□□□□□ -0.25
ATG3-202ENST00000402314 FKTNO75072 461 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 SNX4O95219 450 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 RETP07949 1114 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 RPS19P39019 145 aaKnown RBP13.52□□□□□ -0.25
ATG3-202ENST00000402314 WNT3P56703 355 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 PRKCDQ05655 676 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 MESP2Q0VG99 397 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 GPR50Q13585 617 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 KEAP1Q14145 624 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 NFE2L1Q14494 772 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 IER5LQ5T953 404 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 LRRC70Q7Z2Q7 622 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 NOXA1Q86UR1 476 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 PIK3R3Q92569 461 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 OR4K3Q96R72 315 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 BCL7BQ9BQE9 202 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 WRAP53Q9BUR4 548 aaKnown RBP13.52□□□□□ -0.25
ATG3-202ENST00000402314 RC3H2Q9HBD1 1191 aaKnown RBP13.52□□□□□ -0.25
ATG3-202ENST00000402314 RHCGQ9UBD6 479 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 SPEF1Q9Y4P9 236 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 REV3LO60673 3130 aa13.52□□□□□ -0.25
ATG3-202ENST00000402314 MAGEB17A8MXT2 336 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 PLK4O00444 970 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 LILRB3O75022 631 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 SLC16A8O95907 504 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CTSLP07711 333 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
ATG3-202ENST00000402314 FPR1P21462 350 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 PRKACBP22694 351 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 FEN1P39748 380 aaKnown RBP13.51□□□□□ -0.25
ATG3-202ENST00000402314 CHRNEQ04844 493 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 GRIN2CQ14957 1233 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 HKDC1Q2TB90 917 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 LINC00299Q6ZSB3 139 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 ZNF605Q86T29 641 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 ADIPOR2Q86V24 386 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 SLC5A8Q8N695 610 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 ZNF557Q8N988 423 aaPredicted RBP13.51□□□□□ -0.25
ATG3-202ENST00000402314 OR9Q2Q8NGE9 314 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CMTM7Q96FZ5 175 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 ZDHHC4Q9NPG8 344 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 IMPAD1Q9NX62 359 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CLCA3PQ9Y6N3 262 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 PLXNB3Q9ULL4 1909 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CCDC88CQ9P219 2028 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 ANTXRLA6NF34 631 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 GFYI3L273 518 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 GPX5O75715 221 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CBSLP0DN79 551 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CCL5P13501 91 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 CBSP35520 551 aa13.51□□□□□ -0.25
ATG3-202ENST00000402314 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
ATG3-202ENST00000402314 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
ATG3-202ENST00000402314 MEF2AQ02078 507 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms