RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SYT16Q17RD7 645 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 PTCHD3Q3KNS1 767 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ALG1LQ6GMV1 187 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ZNF782Q6ZMW2 699 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 UBE2R2Q712K3 238 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 B3GNT8Q7Z7M8 397 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 COMMD7Q86VX2 200 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CLECL1Q8IZS7 167 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 RBFAQ8N0V3 343 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 VWA5B2Q8N398 1253 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CPA6Q8N4T0 437 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 C2orf73Q8N5S3 287 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 ZBTB44Q8NCP5 570 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ZNF548Q8NEK5 533 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 OR52J3Q8NH60 311 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ZNF461Q8TAF7 563 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 FBLIM1Q8WUP2 373 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 FBXW5Q969U6 566 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TBC1D20Q96BZ9 403 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 PANX1Q96RD7 426 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SDHCQ99643 169 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 TTLL2Q9BWV7 592 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 MCCC2Q9HCC0 563 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ABCB8Q9NUT2 735 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 VNN3Q9NY84 501 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SLC23A1Q9UHI7 598 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ABCG2Q9UNQ0 655 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 YIPF1Q9Y548 306 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 PLXNA4Q9HCM2 1894 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CFAP54Q96N23 3096 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 LOC100506127A0A0U1RQW1 187 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TMEM202A6NGA9 273 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 H7C4K7 107 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 RFXANKO14593 260 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 INPPL1O15357 1258 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TRBC1P01850 177 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 OPN1SWP03999 348 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 INHAP05111 366 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 LCKP06239 509 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 HOXD4P09016 255 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 NUDT7P0C024 238 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 GADD45AP24522 165 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ACRV1P26436 265 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 S100A3P33764 101 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 PIK3CBP42338 1070 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 RPS14P62263 151 aaKnown RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 POLR2GP62487 172 aaKnown RBP eCLIP4.83□□□□□ -1.64
SSR1-202ENST00000397511 DAB2P98082 770 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 RIN1Q13671 783 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 QPRTQ15274 297 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 UAP1L1Q3KQV9 507 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ZNF600Q6ZNG1 722 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 Q6ZVU0 165 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CEP68Q76N32 757 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SNX20Q7Z614 316 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TMEM150AQ86TG1 271 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TRIM48Q8IWZ4 208 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 NKAIN3Q8N8D7 197 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 IPCEF1Q8WWN9 437 aaPredicted RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 ASB15Q8WXK1 588 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 FATE1Q969F0 183 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 PPP3R2Q96LZ3 170 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 OPALINQ96PE5 141 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SECISBP2Q96T21 854 aaKnown RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 P2RY13Q9BPV8 354 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 SLC6A15Q9H2J7 730 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 RNF121Q9H920 327 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 ZDHHC4Q9NPG8 344 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TAS2R7Q9NYW3 318 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CFAP97Q9P2B7 532 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CCL26Q9Y258 94 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 CCL27Q9Y4X3 112 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 TNPO3Q9Y5L0 923 aaKnown RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 CSNK1G3Q9Y6M4 447 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 HSPE1-MOB4S4R3N1 261 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 KIAA0100Q14667 2235 aaKnown RBP4.83□□□□□ -1.64
SSR1-202ENST00000397511 MYO9BQ13459 2157 aa4.83□□□□□ -1.64
SSR1-202ENST00000397511 A0A1W2PRQ8 180 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 ZNF98A6NK75 572 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 M0R129 80 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 MANBAO00462 879 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PPM1BO75688 479 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 OR5F1O95221 314 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CLDN9O95484 217 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 BPNT1O95861 308 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 DNTTP04053 509 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 TP53P04637 393 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 ANXA5P08758 320 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HIST1H2AGP0C0S8 130 aaPredicted RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 ITGAMP11215 1152 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 POU2F1P14859 743 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HIST1H2ADP20671 130 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 LHCGRP22888 699 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 HAAOP46952 286 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 PREPP48147 710 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CCT3P49368 545 aaKnown RBP4.82□□□□□ -1.64
SSR1-202ENST00000397511 TPMTP51580 245 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CLCN4P51793 760 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 CYP4F2P78329 520 aa4.82□□□□□ -1.64
SSR1-202ENST00000397511 UBE3AQ05086 875 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms