RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ETS1P14921 441 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 CCND1P24385 295 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 SSR4P51571 173 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 BTG2P78543 158 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 PLGLB1Q02325 96 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 CHRFAM7AQ494W8 412 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 DEFB134Q4QY38 66 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 RIPPLY2Q5TAB7 128 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 NDUFAF5Q5TEU4 345 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 ARMC3Q5W041 872 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 CENPUQ71F23 418 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 TRILQ7L0X0 811 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 PEX26Q7Z412 305 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 STRA8Q7Z7C7 330 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 SLC22A16Q86VW1 577 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 KIF18BQ86Y91 864 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 ABHD11Q8NFV4 315 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 OR2M7Q8NG81 312 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 KCNJ9Q92806 393 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 CCL19Q99731 98 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 TTTY12Q9BZ98 90 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 INTS10Q9NVR2 710 aaKnown RBP8.73□□□□□ -1.01
NEDD9-203ENST00000397378 KCMF1Q9P0J7 381 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 MTRF1LQ9UGC7 380 aaKnown RBP8.73□□□□□ -1.01
NEDD9-203ENST00000397378 ZNF223Q9UK11 482 aaPredicted RBP8.73□□□□□ -1.01
NEDD9-203ENST00000397378 ERVK-11Q9UQG0 969 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 SH2B3Q9UQQ2 575 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 ZNF148Q9UQR1 794 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 MED16Q9Y2X0 877 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 DHRS7Q9Y394 339 aa8.73□□□□□ -1.01
NEDD9-203ENST00000397378 HSPB2A8KAH6 182 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 A8MVJ9 347 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 EIF3FO00303 357 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-203ENST00000397378 AQP7O14520 342 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 NDUFS4O43181 175 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 CEP104O60308 925 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 RNH1P13489 461 aaKnown RBP8.72□□□□□ -1.01
NEDD9-203ENST00000397378 GABRA1P14867 456 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 MAOAP21397 527 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 GPR143P51810 404 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 OLR1P78380 273 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 CUL1Q13616 776 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 HSPB2Q16082 182 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 HYAL4Q2M3T9 481 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 FBXL19-AS1Q494R0 122 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 WLSQ5T9L3 541 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 LCTLQ6UWM7 567 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 GK5Q6ZS86 529 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 UBE2R2Q712K3 238 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-203ENST00000397378 ABHD13Q7L211 337 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 PRUNE1Q86TP1 453 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 FAM109AQ8N4B1 249 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 CCDC89Q8N998 374 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 MAPK1IP1LQ8NDC0 245 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 OR4K1Q8NGD4 311 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 NT5CQ8TCD5 201 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 VMP1Q96GC9 406 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 SGPP1Q9BX95 441 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 LACRTQ9GZZ8 138 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 NECTIN3Q9NQS3 549 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 YAE1D1Q9NRH1 226 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 SYBUQ9NX95 663 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 ZFATQ9P243 1243 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 FBXW2Q9UKT8 454 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 ACAD8Q9UKU7 415 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 SOX13Q9UN79 622 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 PACSIN2Q9UNF0 486 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-203ENST00000397378 MMACHCQ9Y4U1 282 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 LIPGQ9Y5X9 500 aa8.72□□□□□ -1.01
NEDD9-203ENST00000397378 EPN1Q9Y6I3 576 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-203ENST00000397378 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.01
NEDD9-203ENST00000397378 TRBC2A0A5B9 178 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 A8MUA0 341 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 PSMD12O00232 456 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-203ENST00000397378 OR1F1O43749 312 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 ZFAND5O76080 213 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 MYO1DO94832 1006 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 B3GALT4O96024 378 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 ZNF888P0CJ79 500 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-203ENST00000397378 CDH1P12830 882 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 NPPBP16860 134 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 CNR1P21554 472 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 MGAT1P26572 445 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 RPL22P35268 128 aaKnown RBP8.71□□□□□ -1.02
NEDD9-203ENST00000397378 ANP32AP39687 249 aaKnown RBP8.71□□□□□ -1.02
NEDD9-203ENST00000397378 MAGEA5P43359 124 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 CDK16Q00536 496 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 RGS1Q08116 209 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 BBS9Q3SYG4 887 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 NEPROQ6NW34 567 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 AGTRAPQ6RW13 159 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 CES3Q6UWW8 571 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 C4orf22Q6V702 233 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 SYCE1Q8N0S2 351 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 TBC1D19Q8N5T2 526 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 TMEM251Q8N6I4 163 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 CD200R1Q8TD46 325 aa8.71□□□□□ -1.02
NEDD9-203ENST00000397378 UTP15Q8TED0 518 aaKnown RBP8.71□□□□□ -1.02
NEDD9-203ENST00000397378 ASB15Q8WXK1 588 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms