RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 MUM1Q2TAK8 710 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 IRAK1BP1Q5VVH5 260 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF425Q6IV72 752 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 METTL2BQ6P1Q9 378 aaKnown RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 PRMT9Q6P2P2 845 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 NDUFAF7Q7L592 441 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 LRRC56Q8IYG6 542 aaPredicted RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 CSNK1A1LQ8N752 337 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 CCNYL1Q8N7R7 359 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF480Q8WV37 535 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 MACROD1Q9BQ69 325 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 YIPF2Q9BWQ6 316 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 EML4Q9HC35 981 aaKnown RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 MRPS30Q9NP92 439 aaKnown RBP9.77□□□□□ -0.85
NEDD8-202ENST00000396828 ABCF3Q9NUQ8 709 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 THAP1Q9NVV9 213 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 WWOXQ9NZC7 414 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 TRPC4Q9UBN4 977 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 TAC3Q9UHF0 121 aa9.77□□□□□ -0.85
NEDD8-202ENST00000396828 A0A0A6YYC8 382 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 NSG1A0A0A6YYJ2 146 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 IGHV3-20A0A0C4DH32 117 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 A0A1W2PQ72 361 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ARHGAP10A1A4S6 786 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF839A8K0R7 811 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 E7ENX8 843 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 I3L1I5 382 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 MYO1CO00159 1063 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 SUPT7LO94864 414 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 SLC16A8O95907 504 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 STSP08842 583 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 MST1P26927 711 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 EEF1DP29692 281 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 CMPK1P30085 196 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 HSD17B2P37059 387 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 SLC1A6P48664 564 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 PIK3CGP48736 1102 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 PNLIPRP1P54315 467 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ABCE1P61221 599 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ARG2P78540 354 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 TAP2Q03519 686 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 PRDX1Q06830 199 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 BST1Q10588 318 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 RCN2Q14257 317 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 PCOLCEQ15113 449 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF678Q5SXM1 525 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ICE2Q659A1 982 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 SP5Q6BEB4 398 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 RPUSD3Q6P087 351 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 FAM180AQ6UWF9 173 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ZCCHC23Q6ZST2 131 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 PRSS41Q7RTY9 318 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 CPLX4Q7Z7G2 160 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ZC3H7AQ8IWR0 971 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 KBTBD2Q8IY47 623 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 RHBDF1Q96CC6 855 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 FBXL8Q96CD0 374 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 MMABQ96EY8 250 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 MAGEB10Q96LZ2 347 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 TMEM237Q96Q45 408 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 TRMOQ9BU70 441 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 GATA5Q9BWX5 397 aaPredicted RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 CD244Q9BZW8 370 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 DRC3Q9H069 523 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 OLAHQ9NV23 265 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 SPATA7Q9P0W8 599 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 PTBP2Q9UKA9 531 aaKnown RBP9.76□□□□□ -0.85
NEDD8-202ENST00000396828 STK38LQ9Y2H1 464 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 ANGPTL3Q9Y5C1 460 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 SCN3AQ9NY46 2000 aa9.76□□□□□ -0.85
NEDD8-202ENST00000396828 LOC102723996A0A087X1L8 192 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 PCDH17O14917 1159 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 HAT1O14929 419 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 CCNT2O60583 730 aaKnown RBP9.75□□□□□ -0.85
NEDD8-202ENST00000396828 SNNO75324 88 aaPredicted RBP9.75□□□□□ -0.85
NEDD8-202ENST00000396828 MLYCDO95822 493 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 WDPCPO95876 746 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 SERPINA7P05543 415 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 HEXBP07686 556 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 GGT5P36269 586 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 SEC24CP53992 1094 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 PMP22Q01453 160 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 PCBP2Q15366 365 aaKnown RBP eCLIP9.75□□□□□ -0.859e-10■□□□□ 8.1
NEDD8-202ENST00000396828 TMEM205Q6UW68 189 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 FAM47EQ6ZV65 393 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 LANCL3Q6ZV70 420 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 CRLF3Q8IUI8 442 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 KIRREL3Q8IZU9 778 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 BCORP1Q8N888 145 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 OR6Y1Q8NGX8 325 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 UBTD2Q8WUN7 234 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 SMPDL3AQ92484 453 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 HAS2Q92819 552 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 MARVELD3Q96A59 401 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 IMMP1LQ96LU5 166 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 C7orf26Q96N11 449 aa9.75□□□□□ -0.85
NEDD8-202ENST00000396828 ZNF317Q96PQ6 595 aaPredicted RBP9.75□□□□□ -0.85
NEDD8-202ENST00000396828 C1QTNF3Q9BXJ4 246 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms