RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 HCFC1R1Q9NWW0 138 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SEC24DO94855 1032 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 RCBTB2O95199 551 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 THRBP10828 461 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 NUMBP49757 651 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 RACK1P63244 317 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 COLEC12Q5KU26 742 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SLC15A3Q8IY34 581 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ABHD11Q8NFV4 315 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 GIPC3Q8TF64 312 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 FAM3CQ92520 227 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF764Q96H86 408 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 C1QTNF2Q9BXJ5 285 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SLITRK2Q9H156 845 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 P2RY12Q9H244 342 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 CRISPLD1Q9H336 500 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 CXXC1Q9P0U4 656 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 CRNNQ9UBG3 495 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 OAZ3Q9UMX2 235 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 RGS10O43665 173 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 LRATO95237 230 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 P2RY2P41231 377 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PREPP48147 710 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 MAP2K6P52564 334 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SMSP52788 366 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ROR2Q01974 943 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ACY1Q03154 408 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 GAS6Q14393 721 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 LIN52Q52LA3 116 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PGM2L1Q6PCE3 622 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 WASH2PQ6VEQ5 465 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 CANT1Q8WVQ1 401 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 OSTF1Q92882 214 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SLC35G5Q96KT7 338 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 EPYCQ99645 322 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TM9SF3Q9HD45 589 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 WASH6PQ9NQA3 447 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 WASF2Q9Y6W5 498 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 FASNP49327 2511 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 EPG5Q9HCE0 2579 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SLC22A1O15245 554 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ALOX12P18054 663 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 HIST1H1TP22492 207 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TAB1Q15750 504 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ATP6AP1Q15904 470 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM52BQ4KMG9 183 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ARMCX4Q5H9R4 360 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM184AQ6ZMB5 413 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ADCK1Q86TW2 530 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 OR9I1Q8NGQ6 314 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 OR5K1Q8NHB7 308 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 SMG9Q9H0W8 520 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ABCG8Q9H221 673 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PTTG2Q9NZH5 202 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 MAN2B2Q9Y2E5 1009 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TRIM43BA6NCK2 446 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 NPIPB8E9PQR5 432 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 H7BY64 318 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 DENRO43583 198 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TGFB1P01137 390 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF24P17028 368 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 GPX2P18283 190 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 AGXTP21549 392 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 POU1F1P28069 291 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 CXCL12P48061 93 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PRKAG1P54619 331 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ERVPABLB-1P60509 514 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ANKRD54Q6NXT1 300 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 GK5Q6ZS86 529 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PARS2Q7L3T8 475 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TRIM43Q96BQ3 446 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 BMFQ96LC9 184 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 HS6ST2Q96MM7 605 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PRAP1Q96NZ9 151 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 IRF2BPLQ9H1B7 796 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 KCNK13Q9HB14 408 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 DUSP12Q9UNI6 340 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 A8MVJ9 347 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ARPC2O15144 300 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 NME6O75414 186 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PRKCGP05129 697 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 H1F0P07305 194 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 GDF5P43026 501 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 MAGEA10P43363 369 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 RABGGTBP53611 331 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ALDH6A1Q02252 535 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 HHEXQ03014 270 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 GBX1Q14549 363 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 NFATC4Q14934 902 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 KLHL26Q53HC5 615 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 PAOXQ6QHF9 649 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM64Q6YI46 380 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 TAS1R1Q7RTX1 841 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 MARVELD2Q8N4S9 558 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 ST13P5Q8NFI4 369 aaPredicted RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 LRCH3Q96II8 777 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 DPH7Q9BTV6 452 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 CLMPQ9H6B4 373 aa3.25□□□□□ -1.89
VPS13C-203ENST00000395896 NXT1Q9UKK6 140 aaKnown RBP3.25□□□□□ -1.89
VPS13C-203ENST00000395896 V9GYQ6 96 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms