RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 EOGTQ5NDL2 527 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 GPR153Q6NV75 609 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ANKRD54Q6NXT1 300 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 METTL2BQ6P1Q9 378 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 C17orf64Q86WR6 236 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CNTN4Q8IWV2 1026 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ADGRG2Q8IZP9 1017 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TMEM132CQ8N3T6 1108 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 DCBLD1Q8N8Z6 715 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 OR6C4Q8NGE1 309 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 PCNPQ8WW12 178 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 RPL3LQ92901 407 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 TEX12Q9BXU0 123 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 LRRC3Q9BY71 257 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 NARFLQ9H6Q4 476 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ANKRA2Q9H9E1 313 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 LRTM1Q9HBL6 345 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 SGK2Q9HBY8 427 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ZBTB20Q9HC78 741 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 IRAK3Q9Y616 596 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ELOVL7A1L3X0 281 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ARHGEF33A8MVX0 844 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 H3BN98 237 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 I6L893 689 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 hCG_2039718K7EN88 272 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 STX16O14662 325 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ACOT8O14734 319 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 FPGTO14772 594 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 RGS13O14921 159 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 LILRB3O75022 631 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 JRKO75564 520 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 POP7O75817 140 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 COX7A2P14406 83 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ARNTP27540 789 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CHI3L1P36222 383 aaPredicted RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 EIF2DP41214 584 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 NUDT6P53370 316 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CHIT1Q13231 466 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 NFE2L1Q14494 772 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 PLEKHS1Q5SXH7 462 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ZNF549Q6P9A3 640 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CASP12Q6UXS9 341 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TSPAN33Q86UF1 283 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 CCDC36Q8IYA8 594 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ZZZ3Q8IYH5 903 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 YIPF7Q8N8F6 280 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 TXNDC5Q8NBS9 432 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 OR10A6Q8NH74 314 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ST8SIA2Q92186 375 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 FYTTD1Q96QD9 318 aaKnown RBP5.48□□□□□ -1.53
RFFL-202ENST00000394597 WDR26Q9H7D7 661 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 IFT22Q9H7X7 185 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 AGPAT4Q9NRZ5 378 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 HCN3Q9P1Z3 774 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 SCN10AQ9Y5Y9 1956 aa5.48□□□□□ -1.53
RFFL-202ENST00000394597 ISM1B1AKI9 464 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 STMND1H3BQB6 276 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NPC1O15118 1278 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 GJB3O75712 270 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NPPAP01160 153 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 FCER2P06734 321 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PCSK2P16519 638 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ALDH9A1P49189 494 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 VASPP50552 380 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 ANXA11P50995 505 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 PGGT1BP53609 377 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CSNK2BP67870 215 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 EMX1Q04741 257 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 SLC9A5Q14940 896 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TCTN1Q2MV58 587 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CYBRD1Q53TN4 286 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZNF789Q5FWF6 425 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 FAM78AQ5JUQ0 283 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZNF678Q5SXM1 525 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZNF621Q6ZSS3 439 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RRM2BQ7LG56 351 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 HID1Q8IV36 788 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 NRSN1Q8IZ57 195 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SPAG16Q8N0X2 631 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 VWA5B2Q8N398 1253 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 ANKK1Q8NFD2 765 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 VN1R2Q8NFZ6 395 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MZB1Q8WU39 189 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 GLYATL1Q969I3 302 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 C11orf24Q96F05 449 aaPredicted RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 METTL2AQ96IZ6 378 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 ZC3H10Q96K80 434 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 FAM129BQ96TA1 746 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CHIAQ9BZP6 476 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SLC32A1Q9H598 525 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 RNF121Q9H920 327 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 C12orf10Q9HB07 376 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 IL21Q9HBE4 155 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 CD93Q9NPY3 652 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 TMCC3Q9ULS5 477 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 PPIEQ9UNP9 301 aaKnown RBP5.47□□□□□ -1.53
RFFL-202ENST00000394597 COLEC10Q9Y6Z7 277 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 SH3D21A4FU49 640 aa5.47□□□□□ -1.53
RFFL-202ENST00000394597 MROH6A6NGR9 719 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms