RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PCDHGA2Q9Y5H1 932 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 ZFP37Q9Y6Q3 630 aaPredicted RBP18.11■□□□□ 0.49
HOXC6-202ENST00000394331 PCP4L1A6NKN8 68 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 H7C4K7 107 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 QSOX1O00391 747 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 KELP23276 732 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 SLC6A4P31645 630 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 AGTR2P50052 363 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 NUDT6P53370 316 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 DUSP4Q13115 394 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 POU4F3Q15319 338 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 PTPRNQ16849 979 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 SPANXN4Q5MJ08 99 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 BICRALQ6AI39 1079 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 PHC2Q8IXK0 858 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 CPA6Q8N4T0 437 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 SLC37A3Q8NCC5 494 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 KCNC2Q96PR1 638 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 GPR21Q99679 349 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 SOSTQ9BQB4 213 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 OR51B5Q9H339 312 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 SERHL2Q9H4I8 314 aa18.11■□□□□ 0.49
HOXC6-202ENST00000394331 LYARQ9NX58 379 aaKnown RBP18.11■□□□□ 0.49
HOXC6-202ENST00000394331 FAM240BA0A1B0GVZ2 78 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 PCDH17O14917 1159 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 LYRM1O43325 122 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 HRO43593 1189 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 CYP17A1P05093 508 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 LPOP22079 712 aaPredicted RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 SF3A2Q15428 464 aaKnown RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 GTDC1Q4AE62 458 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 TRIQKQ629K1 86 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 PLAG1Q6DJT9 500 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 EIF3MQ7L2H7 374 aaKnown RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 C10orf111Q8N326 155 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 OR10Q1Q8NGQ4 319 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 ZFP64Q9NPA5 681 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 ACSL5Q9ULC5 683 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 NDRG2Q9UN36 371 aaKnown RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 LSM2Q9Y333 95 aaKnown RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 AP1M2Q9Y6Q5 423 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 A0A1W2PQL4 384 aaPredicted RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 SLC38A8A6NNN8 435 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 A8MVJ9 347 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 CLDN11O75508 207 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 PKMP14618 531 aaKnown RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 CR2P20023 1033 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 CD9P21926 228 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 GNA13Q14344 377 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 IQCCQ4KMZ1 466 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 ZNF628Q5EBL2 1059 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 KLHL17Q6TDP4 642 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 TMEM107Q6UX40 140 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 CBLL1Q75N03 491 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 KCT2Q8NC54 265 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 METTL6Q8TCB7 284 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 ZBED6CLQ96FA7 236 aaPredicted RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 KCNJ15Q99712 375 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 EXOSC4Q9NPD3 245 aaKnown RBP18.1■□□□□ 0.49
HOXC6-202ENST00000394331 NDUFB11Q9NX14 153 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 SCML1Q9UN30 329 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 POFUT2Q9Y2G5 429 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 ACTL7AQ9Y615 435 aa18.1■□□□□ 0.49
HOXC6-202ENST00000394331 CDC7O00311 574 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 BTN3A1O00481 513 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 VNN2O95498 520 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 RGRP47804 291 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 TTPAP49638 278 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 HTR6P50406 440 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 ELAVL2Q12926 359 aaKnown RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 MDGA1Q8NFP4 955 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 RADILQ96JH8 1075 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 OR52E6Q96RD3 313 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 ELAC1Q9H777 363 aaKnown RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 MS4A12Q9NXJ0 267 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 KIF25Q9UIL4 384 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 MGAT4AQ9UM21 535 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 SGK494L7N484 410 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 MPZL2O60487 215 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 FHP07954 510 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 LHCGRP22888 699 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 MAP2K6P52564 334 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 RAB14P61106 215 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 FUT10Q6P4F1 479 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 MED18Q9BUE0 208 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 SERHLQ9NQF3 203 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 PLEKHB1Q9UF11 243 aaPredicted RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 H3BNC9 293 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 CHP2O43745 196 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 SLC2A2P11168 524 aaPredicted RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 ABRQ12979 859 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 EXOSC2Q13868 293 aaKnown RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 PTGR1Q14914 329 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 RSPO2Q6UXX9 243 aaPredicted RBP18.09■□□□□ 0.49
HOXC6-202ENST00000394331 LIPIQ6XZB0 460 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 AP3S1Q92572 193 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 SGTBQ96EQ0 304 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 ADGRE3Q9BY15 652 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 CD244Q9BZW8 370 aa18.09■□□□□ 0.49
HOXC6-202ENST00000394331 SLC6A17Q9H1V8 727 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms