RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LHPPQ9H008 270 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 COPS7BQ9H9Q2 264 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRDM7Q9NQW5 492 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 RIC8BQ9NVN3 520 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLA2G3Q9NZ20 509 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 FETUBQ9UGM5 382 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 G3BP2Q9UN86 482 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLAAQ9Y263 795 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF451Q9Y4E5 1061 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 TNPO3Q9Y5L0 923 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 MDC1Q14676 2089 aaKnown RBP7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 ANKRD12Q6UB98 2062 aa7.21□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCM1Q15154 2024 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 A0A1W2PQ72 361 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 A8MUI8 341 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 J3QKU1 62 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLPP1O14494 284 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 MAN1A2O60476 641 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PRMT3O60678 531 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 DPM1O60762 260 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 SORBS2O94875 1100 aaKnown RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLDN9O95484 217 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 GBAP04062 536 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ALPPP05187 535 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 SERPINA7P05543 415 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 UQCRHP07919 91 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 RNH1P13489 461 aaKnown RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 JAK1P23458 1154 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ATP5A1P25705 553 aaKnown RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 GSTM2P28161 218 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CASRP41180 1078 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 SSR2P43308 183 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCNG1P51959 295 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 MTTPP55157 894 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 RAB38P57729 211 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR4D2P58180 307 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 SKP1P63208 163 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ID2Q02363 134 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ACTN3Q08043 901 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PCDH1Q08174 1060 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 BTBD16Q32M84 506 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PLEKHN1Q494U1 663 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 UNC50Q53HI1 259 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF678Q5SXM1 525 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 AGAP7PQ5VUJ5 663 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 IRAK1BP1Q5VVH5 260 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 KHDRBS2Q5VWX1 349 aaKnown RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 LIPJQ5W064 366 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 LETMD1Q6P1Q0 360 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PAPD4Q6PIY7 484 aaKnown RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 SH2D5Q6ZV89 423 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CUZD1Q86UP6 607 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 KIF2BQ8N4N8 673 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF454Q8N9F8 522 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 L3MBTL4Q8NA19 623 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CATSPER1Q8NEC5 780 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR4F6Q8NGB9 312 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 WDR20Q8TBZ3 569 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 UBE2E3Q969T4 207 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CNDP1Q96KN2 507 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 IMMP1LQ96LU5 166 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 AGAP4Q96P64 663 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 KCNC2Q96PR1 638 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 SERINC2Q96SA4 455 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 TUBB6Q9BUF5 446 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PARD6BQ9BYG5 372 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 PITHD1Q9GZP4 211 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 FARSBQ9NSD9 589 aaKnown RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 MAP10Q9P2G4 905 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 C19orf25Q9UFG5 118 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ANAPC2Q9UJX6 822 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 ZNF225Q9UK10 706 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 FBXW2Q9UKT8 454 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 TMCO1Q9UM00 188 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLDN16Q9Y5I7 305 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 CCDC88CQ9P219 2028 aa7.2□□□□□ -1.26
HMGB3P1-201ENST00000393368 IGKV3D-11A0A0A0MRZ8 115 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TCRBV16S1A1N1A0A5B0 115 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TTLL8A6PVC2 850 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 WASHC1A8K0Z3 465 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 G3V2L1 256 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 H0YIV9 168 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 CYR61O00622 381 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 LDB3O75112 727 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 GLRA3O75311 464 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 EEDO75530 441 aaKnown RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SUPT7LO94864 414 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 OR4F21O95013 312 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PROCP04070 461 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 KRT4P19013 534 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 TAC1P20366 129 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 HIST1H1TP22492 207 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 ATP5F1P24539 256 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SOX11P35716 441 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 PIK3CBP42338 1070 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 RAP1GDS1P52306 607 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SLC26A5P58743 744 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 HERVK_113P63132 956 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 CLCQ05315 142 aa7.19□□□□□ -1.26
HMGB3P1-201ENST00000393368 SRSF11Q05519 484 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms